DMR 9057 chr19:43979551-43979750 (200bp)

DMR Stats
Positionchr19:43979551-43979750 (View on UCSC)
Width200bp
Genomic Context3' end
Nearest GenesPHLDB3 (0bp away)
ANODEV p-value0.00565744636284
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
9057 PHLDB3 15246 uc002own.4 chr19 43979255 44008985 - 200 100.0 0.45 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (27.5), E16 (73) 100.0
9057 PHLDB3 15246 uc010eit.3 chr19 43979255 43999846 - 200 100.0 0.45 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (27.5), E10 (73) 100.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
9057 chr19 43979372 43979731 wgEncodeRegTfbsClusteredV3 IRF1 score:618, expCount:1, expNums:506, expScores:618, srow:2032281
9057 chr19 43979374 43979641 wgEncodeRegTfbsClusteredV3 EGR1 score:1000, expCount:3, expNums:87,138,216, expScores:977,1000,1000, srow:2032282
9057 chr19 43979375 43979654 wgEncodeRegTfbsClusteredV3 PAX5 score:160, expCount:1, expNums:129, expScores:160, srow:2032283
9057 chr19 43979389 43979664 wgEncodeRegTfbsClusteredV3 SPI1 score:602, expCount:3, expNums:107,126,230, expScores:367,317,602, srow:2032284
9057 chr19 43979391 43979846 wgEncodeRegTfbsClusteredV3 JUND score:435, expCount:2, expNums:507,594, expScores:435,262, srow:2032285
9057 chr19 43979392 43979715 wgEncodeRegTfbsClusteredV3 SP1 score:329, expCount:3, expNums:112,153,234, expScores:310,329,278, srow:2032286
9057 chr19 43979397 43979912 wgEncodeRegTfbsClusteredV3 TFAP2C score:359, expCount:1, expNums:370, expScores:359, srow:2032287
9057 chr19 43979399 43979914 wgEncodeRegTfbsClusteredV3 PML score:292, expCount:1, expNums:227, expScores:292, srow:2032288
9057 chr19 43979403 43979772 wgEncodeRegTfbsClusteredV3 RUNX3 score:487, expCount:1, expNums:109, expScores:487, srow:2032289
9057 chr19 43979409 43979827 wgEncodeRegTfbsClusteredV3 MAX score:1000, expCount:6, expNums:223,278,352,395,460,511, expScores:1000,303,143,214,122,563, srow:2032290
9057 chr19 43979409 43979704 wgEncodeRegTfbsClusteredV3 RCOR1 score:285, expCount:1, expNums:492, expScores:285, srow:2032291
9057 chr19 43979420 43979795 wgEncodeRegTfbsClusteredV3 TBP score:308, expCount:1, expNums:545, expScores:308, srow:2032292
9057 chr19 43979426 43979675 wgEncodeRegTfbsClusteredV3 FOS score:173, expCount:1, expNums:557, expScores:173, srow:2032293
9057 chr19 43979433 43979696 wgEncodeRegTfbsClusteredV3 CEBPB score:209, expCount:1, expNums:378, expScores:209, srow:2032294
9057 chr19 43979439 43979794 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:193, expCount:1, expNums:260, expScores:193, srow:2032295
9057 chr19 43979447 43979726 wgEncodeRegTfbsClusteredV3 CREB1 score:1000, expCount:1, expNums:47, expScores:1000, srow:2032296
9057 chr19 43979460 43979715 wgEncodeRegTfbsClusteredV3 ATF1 score:406, expCount:1, expNums:468, expScores:406, srow:2032297
9057 chr19 43979463 43979741 wgEncodeRegTfbsClusteredV3 NRF1 score:141, expCount:2, expNums:303,518, expScores:141,102, srow:2032298
9057 chr19 43979472 43979827 wgEncodeRegTfbsClusteredV3 TAF7 score:187, expCount:1, expNums:158, expScores:187, srow:2032299
9057 chr19 43979498 43979750 wgEncodeRegTfbsClusteredV3 E2F6 score:653, expCount:2, expNums:215,495, expScores:653,311, srow:2032300
9057 chr19 43979539 43979905 wgEncodeRegTfbsClusteredV3 PHF8 score:1000, expCount:1, expNums:30, expScores:1000, srow:2032301
9057 chr19 43979547 43979559 tfbsConsSites V$SP1_Q6 score:932, zScore:2.14, srow:2489748
9057 chr19 43979601 43979615 tfbsConsSites V$OCT1_Q6 score:855, zScore:2.03, srow:2489749
9057 chr19 43979634 43979650 tfbsConsSites V$YY1_01 score:865, zScore:1.78, srow:2489750
9057 chr19 43979660 43979681 tfbsConsSites V$TCF11MAFG_01 score:752, zScore:1.86, srow:2489751

Omics Overlaps

Dmrid Omic Set Data Plot
9057 cellmeth_recounts PrEC: 2, LNCaP: 5, DU145: 1
9057 cellexp id=ENSG00000176531, name=PHLDB3, PrEC=618, str=880, LNCaP=630, str=330, DU145=475, str=327
9057 tcgameth site:cg18851960, B=0.43, L=0.46, H=0.4
9057 tcgaexp gene=PHLDB3, entrez=653583, pos=chr19:43979255-44008985(-), B=1136, L=1856, M=1726, H=1530