DMR 31637 chr11:47208501-47209350 (850bp)
| DMR Stats | |
|---|---|
| Position | chr11:47208501-47209350 (View on UCSC) |
| Width | 850bp |
| Genomic Context | promoter |
| Nearest Genes | PACSIN3 (490bp away) |
| ANODEV p-value | 8.84362785023e-10 |
| Frequencies | Benign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 31637 | chr11 | 47208681 | 47208688 | phastConsElements100way | lod=24 | score:308, srow:1489661 |
| 31637 | chr11 | 47208711 | 47208719 | phastConsElements100way | lod=23 | score:304, srow:1489662 |
| 31637 | chr11 | 47208773 | 47208782 | phastConsElements100way | lod=25 | score:312, srow:1489663 |
| 31637 | chr11 | 47208785 | 47208786 | phastConsElements100way | lod=14 | score:255, srow:1489664 |
| 31637 | chr11 | 47208796 | 47208859 | phastConsElements100way | lod=295 | score:556, srow:1489665 |
| 31637 | chr11 | 47209182 | 47209192 | phastConsElements100way | lod=56 | score:392, srow:1489666 |
| 31637 | chr11 | 47209202 | 47209212 | phastConsElements100way | lod=13 | score:247, srow:1489667 |
| 31637 | chr11 | 47207189 | 47209176 | cpgIsland | CpG: 156 | length:1988, cpgNum:156, gcNum:1147, perCpg:15.7, perGc:57.7, obsExp:0.94, srow:4097 |
| 31637 | chr11 | 47209177 | 47211176 | cpgShore | — | values(x.gr)[overs$srow, ]:7509 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 31637 | cellmeth_recounts | PrEC: 1, LNCaP: 226, DU145: 4 |  |
| 31637 | cellmeth_diffreps_PrECvsLNCaP | A=1, B=180, Length=1060, Event=Up, log2FC=7.49, padj=0 |  |
| 31637 | cellmeth_diffreps_LNCaPvsDU145 | A=189.22, B=2.81, Length=920, Event=Down, log2FC=-6.08, padj=0 |  |
| 31637 | tcgameth | site:cg08300419, B=0.16, L=0.61, H=0.55 |  |
| 31637 | tcgameth | site:cg24779587, B=0.21, L=0.6, H=0.55 |  |