DMR Stats | |
---|---|
Position | chr1:1435851-1436000 (View on UCSC) |
Width | 150bp |
Genomic Context | intron |
Nearest Genes | ATAD3B (0bp away) |
ANODEV p-value | 0.00179744941208 |
Frequencies | Benign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 2.0 (22.22 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
11 | ATAD3B | 71 | uc021oeq.1 | chr1 | 1421162 | 1444689 | + | 150 | 100.0 | 0.42 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (100), E8 (0) | 0.0 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
11 | cellmeth_recounts | PrEC: 6, LNCaP: 11, DU145: 33 | |
11 | cellmeth_diffreps_PrECvsDU145 | A=3, B=20, Length=220, Event=Up, log2FC=2.74, padj=0.00580821601255095 | |
11 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 | |
11 | tcgaexp | gene=ATAD3B, entrez=83858, pos=chr1:1407164-1444689(+), B=521, L=737, M=722, H=785 | |
11 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |