DMR Stats | |
---|---|
Position | chr17:90301-90450 (View on UCSC) |
Width | 150bp |
Genomic Context | intron |
Nearest Genes | RPH3AL (0bp away) |
ANODEV p-value | 0.00386301989017 |
Frequencies | Benign: 6.0 (85.71%), Low: 6.0 (100.0%), High: 9.0 (100.0 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
33858 | RPH3AL | 11877 | uc010cjl.2 | chr17 | 62180 | 202633 | - | 150 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) | 0.0 |
33858 | RPH3AL | 11877 | uc010vpy.2 | chr17 | 62180 | 177370 | - | 150 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0) | 0.0 |
33858 | RPH3AL | 11877 | uc002frf.2 | chr17 | 62180 | 202633 | - | 150 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
33858 | RPH3AL | 11877 | uc021tmx.1 | chr17 | 62180 | 202633 | - | 150 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
33858 | RPH3AL | 11877 | uc002fre.2 | chr17 | 62180 | 202633 | - | 150 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (100), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
33858 | chr17 | 90159 | 90514 | wgEncodeRegTfbsClusteredV3 | MAX | score:228, expCount:1, expNums:511, expScores:228, srow:1606245 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
33858 | cellmeth_recounts | PrEC: 6, LNCaP: 0, DU145: 8 | |
33858 | cellexp | id=ENSG00000181031, name=RPH3AL, PrEC=139, str=116, LNCaP=825, str=593, DU145=1180, str=616 | |
33858 | tcgaexp | gene=RPH3AL, entrez=9501, pos=chr17:62180-202633(-), B=579, L=622, M=682, H=475 | |
33858 | tcgaexp | gene=ARHGAP27, entrez=201176, pos=chr17:86404-43511112(-), B=1570, L=1264, M=1273, H=1486 |