DMR Stats | |
---|---|
Position | chr1:2303151-2303350 (View on UCSC) |
Width | 200bp |
Genomic Context | intron |
Nearest Genes | MORN1 (0bp away) |
ANODEV p-value | 0.00563861173118 |
Frequencies | Benign: 4.0 (57.14%), Low: 6.0 (100.0%), High: 6.0 (66.67 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
24 | MORN1 | 99 | uc001ajb.1 | chr1 | 2252696 | 2322993 | - | 200 | 100.0 | 6.9 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (100), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) | 0.0 |
24 | MORN1 | 99 | uc001ajd.1 | chr1 | 2286616 | 2322993 | - | 200 | 100.0 | 0.6 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (100), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) | 0.0 |
24 | MORN1 | 99 | uc009vld.3 | chr1 | 2263565 | 2322993 | - | 200 | 100.0 | 4.68 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (100), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
24 | chr1 | 2302160 | 2304159 | cpgShore | — | values(x.gr)[overs$srow, ]:300 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
24 | cellmeth_recounts | PrEC: 11, LNCaP: 6, DU145: 27 | |
24 | cellexp | id=ENSG00000116151, name=MORN1, PrEC=59, str=110, LNCaP=366, str=166, DU145=90, str=55 | |
24 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 | |
24 | tcgaexp | gene=MORN1, entrez=79906, pos=chr1:2252696-2322993(-), B=219, L=217, M=237, H=224 | |
24 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |