DMR Stats | |
---|---|
Position | chr1:1286801-1287050 (View on UCSC) |
Width | 250bp |
Genomic Context | intergenic |
Nearest Genes | MXRA8 (1020bp away) |
ANODEV p-value | 0.00476869235335 |
Frequencies | Benign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
Frequent? |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
36502 | chr1 | 1286806 | 1287835 | wgEncodeRegDnaseClusteredV2 | 66 | score:757, srow:579 |
36502 | chr1 | 1285346 | 1287345 | cpgShore | — | values(x.gr)[overs$srow, ]:130 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
36502 | cellmeth_recounts | PrEC: 15, LNCaP: 291, DU145: 15 | |
36502 | cellmeth_diffreps_PrECvsLNCaP | A=22, B=237, Length=600, Event=Up, log2FC=3.43, padj=0 | |
36502 | cellmeth_diffreps_LNCaPvsDU145 | A=253.36, B=11.22, Length=600, Event=Down, log2FC=-4.5, padj=0 | |
36502 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 | |
36502 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |