DMR Stats | |
---|---|
Position | chr1:1367801-1368050 (View on UCSC) |
Width | 250bp |
Genomic Context | intergenic |
Nearest Genes | VWA1 (2852bp away) |
ANODEV p-value | 0.00988120200909 |
Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 3.0 (33.33 %) |
Frequent? |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
36505 | chr1 | 1365300 | 1368767 | cpgShelf | — | values(x.gr)[overs$srow, ]:80 |
36505 | chr1 | 1367626 | 1368575 | wgEncodeRegDnaseClusteredV2 | 21 | score:1000, srow:664 |
36505 | chr1 | 1366894 | 1367923 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:1000, expCount:7, expNums:147,191,192,249,445,446,616, expScores:316,748,340,301,209,353,327, srow:3766 |
36505 | chr1 | 1367206 | 1367821 | wgEncodeRegTfbsClusteredV3 | MYBL2 | score:281, expCount:1, expNums:186, expScores:281, srow:3773 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
36505 | cellmeth_recounts | PrEC: 19, LNCaP: 55, DU145: 3 | |
36505 | cellmeth_diffreps_PrECvsDU145 | A=38, B=1, Length=420, Event=Down, log2FC=-5.25, padj=2.56051906907383e-09 | |
36505 | cellmeth_diffreps_PrECvsDU145 | A=35, B=1, Length=580, Event=Down, log2FC=-5.13, padj=1.81683967010991e-08 | |
36505 | cellmeth_diffreps_LNCaPvsDU145 | A=78.04, B=1.87, Length=760, Event=Down, log2FC=-5.38, padj=0 | |
36505 | cellexp | id=ENSG00000225285, name=RP4-758J18.10, PrEC=10, str=4, LNCaP=172, str=173, DU145=54, str=21 | |
36505 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 | |
36505 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |