DMR Stats | |
---|---|
Position | chr5:140011451-140011600 (View on UCSC) |
Width | 150bp |
Genomic Context | 3' end |
Nearest Genes | CD14 (0bp away) |
ANODEV p-value | 0.000362738989127 |
Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38089 | CD14 | 23185 | uc003lgi.2 | chr5 | 140011313 | 140013035 | - | 150 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (100) | 100.0 |
38089 | CD14 | 23185 | uc003lgj.2 | chr5 | 140011313 | 140013286 | - | 150 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 100.0 |
38089 | CD14 | 23185 | uc021yej.1 | chr5 | 140011313 | 140013286 | - | 150 | 100.0 | 0.08 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 100.0 |
38089 | CD14 | 23185 | uc021yek.1 | chr5 | 140011313 | 140013286 | - | 150 | 100.0 | 0.07 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 100.0 |
38089 | CD14 | 23185 | uc021yel.1 | chr5 | 140011443 | 140012573 | - | 150 | 100.0 | 0.07 | 0 | 0.0 | E1 (100) | 100.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
38089 | chr5 | 140009483 | 140011482 | cpgShore | — | values(x.gr)[overs$srow, ]:38215 |
38089 | chr5 | 140011549 | 140011549 | cosmic | COSM380193 | srow:970169 |
38089 | chr5 | 140011531 | 140011531 | cosmic | COSM1061721 | srow:970168 |
38089 | chr5 | 140011505 | 140011505 | cosmic | COSM292991 | srow:970167 |
38089 | chr5 | 140011461 | 140011461 | cosmic | COSM1433639 | srow:970166 |
38089 | chr5 | 140011591 | 140011602 | tfbsConsSites | V$MEIS1_01 | score:899, zScore:1.76, srow:4252911 |
38089 | chr5 | 140011594 | 140011607 | tfbsConsSites | V$MEIS1AHOXA9_01 | score:795, zScore:1.85, srow:4252912 |
38089 | chr5 | 140011552 | 140012830 | wgEncodeRegTfbsClusteredV3 | EZH2 | score:400, expCount:2, expNums:21,36, expScores:322,317, srow:3331606 |
38089 | chr5 | 140011580 | 140011584 | phastConsElements100way | lod=24 | score:308, srow:7314861 |
38089 | chr5 | 140011464 | 140011470 | phastConsElements100way | lod=23 | score:304, srow:7314860 |
38089 | chr5 | 140011483 | 140012739 | cpgIsland | CpG: 96 | length:1257, cpgNum:96, gcNum:787, perCpg:15.3, perGc:62.6, obsExp:0.78, srow:21129 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
38089 | cellmeth_recounts | PrEC: 0, LNCaP: 1, DU145: 6 | |
38089 | cellexp | id=ENSG00000170458, name=CD14, PrEC=67, str=53, LNCaP=5, str=3, DU145=82, str=21 | |
38089 | tcgaexp | gene=CD14, entrez=929, pos=chr5:140011313-140013286(-), B=1646, L=1718, M=1490, H=1430 | |
38089 | pubmed | gene=CD14, G=11192, GP=43, GC=1987, GM=30, GPM=1, GCM=6 |