DMR Stats | |
---|---|
Position | chr1:4722251-4722400 (View on UCSC) |
Width | 150bp |
Genomic Context | intron |
Nearest Genes | AJAP1 (0bp away) |
ANODEV p-value | 0.0140133324645 |
Frequencies | Benign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 0.0 (0.0 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
54 | AJAP1 | 135 | uc001aln.3 | chr1 | 4715105 | 4843851 | + | 150 | 100.0 | 2.24 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
54 | AJAP1 | 135 | uc001alm.1 | chr1 | 4715105 | 4837854 | + | 150 | 100.0 | 1.65 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
54 | chr1 | 4722134 | 4722357 | wgEncodeRegTfbsClusteredV3 | CEBPB | score:187, expCount:1, expNums:426, expScores:187, srow:11539 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
54 | cellmeth_recounts | PrEC: 2, LNCaP: 0, DU145: 3 | |
54 | cellmeth_diffreps_PrECvsLNCaP | A=136, B=1, Length=620, Event=Down, log2FC=-7.09, padj=0 | |
54 | cellmeth_diffreps_PrECvsDU145 | A=136, B=7, Length=540, Event=Down, log2FC=-4.28, padj=0 | |
54 | cellexp | id=ENSG00000196581, name=AJAP1, PrEC=198, str=110, LNCaP=1, str=0, DU145=0, str=0 | |
54 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 | |
54 | tcgaexp | gene=AJAP1, entrez=55966, pos=chr1:4715105-4843851(+), B=163, L=62, M=59, H=49 | |
54 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |