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DMineR: Prostate Cancer
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DMR List
DMR 238
chr1:41720701-41720850 (150bp)
DMR Stats
Position
chr1:41720701-41720850 (View on UCSC)
Width
150bp
Genomic Context
intergenic
Nearest Genes
SCMH1 (12885bp away)
ANODEV p-value
0.00498474371873
Frequencies
Benign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 1.0 (11.11 %)
Frequent?
Region Count Boxplot
Region Overview
Gene Overlaps
Dmrid
Gene Symbol
Gene Id
Isoform Id
Isoform Chr
Isoform Start
Isoform End
Isoform Strand
Overlap Bp
Query Overlap Per
Isoform Overlap Per
Noncoding
Promoter Per
Exonintron Per
End Per
Feature Overlaps
Dmrid
Feature Chr
Feature Start
Feature End
Set
Name
Fields
Omics Overlaps
Dmrid
Omic Set
Data
Plot
238
cellmeth_recounts
PrEC: 1, LNCaP: 1, DU145: 14
238
cellexp
id=ENSG00000235358, name=RP11-399E6.1, PrEC=0, str=2, LNCaP=4, str=4, DU145=4, str=2
238
tcgaexp
gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305