DMR Stats | |
---|---|
Position | chr1:1174601-1174750 (View on UCSC) |
Width | 150bp |
Genomic Context | intergenic |
Nearest Genes | FAM132A (3075bp away) |
ANODEV p-value | 0.0254885878504 |
Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 4.0 (44.44 %) |
Frequent? |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
36498 | chr1 | 1173866 | 1176515 | wgEncodeRegDnaseClusteredV2 | 59 | score:1000, srow:459 |
36498 | chr1 | 1174033 | 1174722 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:351, expCount:1, expNums:402, expScores:351, srow:2455 |
36498 | chr1 | 1174190 | 1174705 | wgEncodeRegTfbsClusteredV3 | TFAP2C | score:154, expCount:1, expNums:370, expScores:154, srow:2456 |
36498 | chr1 | 1174741 | 1175016 | wgEncodeRegTfbsClusteredV3 | ELF1 | score:134, expCount:1, expNums:217, expScores:134, srow:2457 |
36498 | chr1 | 1174264 | 1177885 | cpgShore | — | values(x.gr)[overs$srow, ]:104 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
36498 | cellmeth_recounts | PrEC: 16, LNCaP: 58, DU145: 0 | |
36498 | cellmeth_diffreps_PrECvsDU145 | A=67, B=1, Length=580, Event=Down, log2FC=-6.07, padj=0 | |
36498 | cellmeth_diffreps_LNCaPvsDU145 | A=394.48, B=0.94, Length=1740, Event=Down, log2FC=-8.72, padj=0 | |
36498 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 | |
36498 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |