DMR 36553 chr1:6283351-6283500 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:6283351-6283500 (View on UCSC) |
| Width | 150bp |
| Genomic Context | exon |
| Nearest Genes | ICMT (0bp away) |
| ANODEV p-value | 0.000857709871905 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36553 | ICMT | 145 | uc001aml.3 | chr1 | 6281253 | 6296044 | - | 150 | 100.0 | 0.19 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (100) | 0.0 |
| 36553 | ICMT | 145 | uc001amk.3 | chr1 | 6281253 | 6296044 | - | 150 | 100.0 | 0.05 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (100) | 0.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 36553 | chr1 | 6283495 | 6283517 | phastConsElements100way | lod=108 | score:457, srow:21712 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 36553 | cellmeth_recounts | PrEC: 11, LNCaP: 5, DU145: 13 |  |
| 36553 | cellexp | id=ENSG00000116237, name=ICMT, PrEC=11330, str=9864, LNCaP=6604, str=9553, DU145=12241, str=18526 |  |
| 36553 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 |  |
| 36553 | tcgaexp | gene=ICMT, entrez=23463, pos=chr1:6281253-6296044(-), B=5872, L=6441, M=5947, H=5900 |  |
| 36553 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |
| 36553 | pubmed | gene=RNF207, G=4, GP=0, GC=1, GM=0, GPM=0, GCM=0 |  |
| 36553 | pubmed | gene=ICMT, G=136, GP=2, GC=51, GM=34, GPM=0, GCM=18 |  |