DMR 25040 chr1:15672401-15672650 (250bp)

DMR Stats
Positionchr1:15672401-15672650 (View on UCSC)
Width250bp
Genomic Contextpromoter
Nearest GenesFHAD1 (0bp away)
ANODEV p-value0.00147387581294
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
25040 FHAD1 269 uc001awb.2 chr1 15573768 15724622 + 250 100.0 52.0 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (100), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (0), E28 (0), I28 (0), E29 (0), I29 (0), E30 (0), I30 (0), E31 (0) 0.0
25040 FHAD1 269 uc001awd.1 chr1 15668232 15711054 + 250 100.0 11.65 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) 0.0
25040 FHAD1 269 uc001awe.1 chr1 15671912 15724622 + 250 100.0 81.95 0 4.4 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) 0.0
25040 FHAD1 269 uc010obl.1 chr1 15671579 15724622 + 250 100.0 46.4 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25040 chr1 15671937 15672420 wgEncodeRegTfbsClusteredV3 SETDB1 score:143, expCount:1, expNums:533, expScores:143, srow:38481
25040 chr1 15672271 15672585 wgEncodeRegTfbsClusteredV3 NR3C1 score:392, expCount:2, expNums:56,57, expScores:392,183, srow:38485
25040 chr1 15672455 15672690 wgEncodeRegTfbsClusteredV3 ATF3 score:324, expCount:1, expNums:208, expScores:324, srow:38507
25040 chr1 15672461 15672696 wgEncodeRegTfbsClusteredV3 BATF score:243, expCount:1, expNums:81, expScores:243, srow:38508
25040 chr1 15672469 15672698 wgEncodeRegTfbsClusteredV3 FOSL1 score:316, expCount:1, expNums:219, expScores:316, srow:38509
25040 chr1 15672393 15672708 wgEncodeRegTfbsClusteredV3 YY1 score:199, expCount:1, expNums:245, expScores:199, srow:38491
25040 chr1 15672400 15672709 wgEncodeRegTfbsClusteredV3 GABPA score:242, expCount:2, expNums:166,220, expScores:127,242, srow:38493
25040 chr1 15672450 15672709 wgEncodeRegTfbsClusteredV3 SMC3 score:227, expCount:1, expNums:408, expScores:227, srow:38506
25040 chr1 15672431 15672710 wgEncodeRegTfbsClusteredV3 MAFK score:288, expCount:1, expNums:510, expScores:288, srow:38501
25040 chr1 15672441 15672716 wgEncodeRegTfbsClusteredV3 SPI1 score:317, expCount:2, expNums:107,230, expScores:235,317, srow:38504
25040 chr1 15672444 15672723 wgEncodeRegTfbsClusteredV3 MAFF score:182, expCount:1, expNums:509, expScores:182, srow:38505
25040 chr1 15672406 15672725 wgEncodeRegTfbsClusteredV3 JUND score:1000, expCount:3, expNums:393,507,594, expScores:352,1000,1000, srow:38496
25040 chr1 15672405 15672760 wgEncodeRegTfbsClusteredV3 MAX score:326, expCount:3, expNums:223,511,576, expScores:326,248,196, srow:38495
25040 chr1 15672401 15672764 wgEncodeRegTfbsClusteredV3 ELF1 score:306, expCount:2, expNums:88,217, expScores:195,306, srow:38494
25040 chr1 15672431 15672764 wgEncodeRegTfbsClusteredV3 FOS score:370, expCount:6, expNums:379,478,556,557,558,590, expScores:141,177,370,207,247,312, srow:38500
25040 chr1 15672396 15672765 wgEncodeRegTfbsClusteredV3 RUNX3 score:361, expCount:1, expNums:109, expScores:361, srow:38492
25040 chr1 15672381 15672776 wgEncodeRegTfbsClusteredV3 JUNB score:235, expCount:1, expNums:593, expScores:235, srow:38490
25040 chr1 15672411 15672792 wgEncodeRegTfbsClusteredV3 JUN score:288, expCount:3, expNums:482,483,484, expScores:184,110,288, srow:38497
25040 chr1 15672434 15672803 wgEncodeRegTfbsClusteredV3 CHD2 score:130, expCount:1, expNums:380, expScores:130, srow:38502
25040 chr1 15672412 15672811 wgEncodeRegTfbsClusteredV3 TAF1 score:194, expCount:2, expNums:169,238, expScores:162,194, srow:38498
25040 chr1 15672379 15672814 wgEncodeRegTfbsClusteredV3 UBTF score:176, expCount:1, expNums:549, expScores:176, srow:38489
25040 chr1 15672441 15672815 wgEncodeRegDnaseClusteredV2 39 score:1000, srow:11955
25040 chr1 15672356 15672819 wgEncodeRegTfbsClusteredV3 MAZ score:333, expCount:2, expNums:396,512, expScores:217,333, srow:38488
25040 chr1 15672416 15672839 wgEncodeRegTfbsClusteredV3 MYC score:149, expCount:2, expNums:487,575, expScores:145,149, srow:38499
25040 chr1 15672209 15672852 wgEncodeRegTfbsClusteredV3 SMARCA4 score:164, expCount:1, expNums:475, expScores:164, srow:38483
  • Page 1 of 2
  • 25 of 30 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25040 cellmeth_recounts PrEC: 1, LNCaP: 1, DU145: 6
25040 cellexp id=ENSG00000142621, name=FHAD1, PrEC=33, str=11, LNCaP=20, str=19, DU145=122, str=134
25040 tcgameth site:cg06207778, B=0.79, L=0.85, H=0.86
25040 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
25040 tcgaexp gene=FHAD1, entrez=114827, pos=chr1:15573768-15726778(+), B=40, L=16, M=28, H=33
25040 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305