DMR 28443 chr6:683851-684050 (200bp)

DMR Stats
Positionchr6:683851-684050 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesEXOC2 (0bp away)
ANODEV p-value2.06348622942e-05
FrequenciesBenign: 2.0 (28.57%), Low: 5.0 (83.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
28443 EXOC2 23632 uc003mtd.4 chr6 485138 693141 - 200 100.0 1.98 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (0), E28 (0) 0.0
28443 EXOC2 23632 uc003mte.4 chr6 485138 693141 - 200 100.0 0.33 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (0), E28 (0), I28 (0), E29 (0), I29 (0), E30 (0) 0.0
28443 EXOC2 23632 uc011dho.3 chr6 485138 693141 - 200 100.0 0.33 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
28443 chr6 683810 683859 phastConsElements100way lod=114 score:462, srow:7487239
28443 chr6 683864 683866 phastConsElements100way lod=21 score:295, srow:7487240
28443 chr6 683863 683877 tfbsConsSites V$TST1_01 score:832, zScore:1.64, srow:4361417
28443 chr6 683874 683883 phastConsElements100way lod=56 score:392, srow:7487241
28443 chr6 683934 683939 phastConsElements100way lod=56 score:392, srow:7487242
28443 chr6 683942 683957 phastConsElements100way lod=80 score:427, srow:7487243
28443 chr6 683964 683967 phastConsElements100way lod=26 score:316, srow:7487244
28443 chr6 683988 684001 tfbsConsSites V$MRF2_01 score:841, zScore:1.96, srow:4361418
28443 chr6 684018 684029 tfbsConsSites V$HFH1_01 score:918, zScore:2.65, srow:4361423
28443 chr6 684015 684030 tfbsConsSites V$FREAC2_01 score:842, zScore:2.25, srow:4361420
28443 chr6 684015 684030 tfbsConsSites V$FREAC4_01 score:860, zScore:2.85, srow:4361421
28443 chr6 684017 684030 tfbsConsSites V$FOXO1_02 score:838, zScore:2.26, srow:4361422
28443 chr6 684014 684031 tfbsConsSites V$FOXJ2_01 score:910, zScore:2.19, srow:4361419
28443 chr6 684050 684063 tfbsConsSites V$GATA1_03 score:869, zScore:2.12, srow:4361424
28443 chr6 683977 684065 phastConsElements100way lod=572 score:622, srow:7487245
28443 chr6 684018 684261 wgEncodeRegTfbsClusteredV3 JUND score:192, expCount:1, expNums:142, expScores:192, srow:3404059
28443 chr6 683962 684265 wgEncodeRegTfbsClusteredV3 FOXP2 score:355, expCount:1, expNums:251, expScores:355, srow:3404051
28443 chr6 683997 684286 wgEncodeRegTfbsClusteredV3 MAFK score:129, expCount:1, expNums:351, expScores:129, srow:3404057
28443 chr6 683974 684297 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:243, expCount:1, expNums:151, expScores:243, srow:3404052
28443 chr6 683979 684308 wgEncodeRegTfbsClusteredV3 CHD2 score:279, expCount:1, expNums:345, expScores:279, srow:3404054
28443 chr6 683974 684325 wgEncodeRegTfbsClusteredV3 RUNX3 score:1000, expCount:1, expNums:109, expScores:1000, srow:3404053
28443 chr6 683747 684326 wgEncodeRegTfbsClusteredV3 ATF2 score:277, expCount:1, expNums:134, expScores:277, srow:3404045
28443 chr6 683993 684336 wgEncodeRegTfbsClusteredV3 MXI1 score:165, expCount:1, expNums:353, expScores:165, srow:3404056
28443 chr6 684009 684343 wgEncodeRegTfbsClusteredV3 ZNF263 score:895, expCount:1, expNums:368, expScores:895, srow:3404058
28443 chr6 684023 684346 wgEncodeRegTfbsClusteredV3 SP1 score:280, expCount:1, expNums:153, expScores:280, srow:3404060
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  • 25 of 35 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
28443 cellmeth_recounts PrEC: 8, LNCaP: 8, DU145: 0
28443 cellmeth_diffreps_PrECvsDU145 A=13, B=0, Length=260, Event=Down, log2FC=-Inf, padj=0.000941091010072773
28443 cellexp id=ENSG00000112685, name=EXOC2, PrEC=3596, str=4505, LNCaP=1056, str=978, DU145=3583, str=3650
28443 tcgaexp gene=GPX5, entrez=2880, pos=chr6:15993-28502728(+), B=17, L=14, M=13, H=29
28443 tcgaexp gene=TRIM27, entrez=5987, pos=chr6:174180-28891768(-), B=3498, L=4532, M=4615, H=4568
28443 tcgaexp gene=OR12D2, entrez=26529, pos=chr6:667404-29365448(+), B=0, L=0, M=0, H=0
28443 tcgaexp gene=OR2W1, entrez=26692, pos=chr6:315387-29012952(-), B=0, L=0, M=0, H=0
28443 tcgaexp gene=OR2J2, entrez=26707, pos=chr6:444717-29142351(+), B=0, L=0, M=0, H=0
28443 tcgaexp gene=EXOC2, entrez=55770, pos=chr6:485138-693141(-), B=1620, L=1627, M=1584, H=1634
28443 tcgaexp gene=OR5V1, entrez=81696, pos=chr6:626454-29324054(-), B=0, L=0, M=0, H=0
28443 tcgaexp gene=OR12D3, entrez=81797, pos=chr6:644333-29343068(-), B=0, L=0, M=0, H=0
28443 tcgaexp gene=SCAND3, entrez=114821, pos=chr6:61611-28555112(-), B=519, L=631, M=811, H=931
28443 tcgaexp gene=ZNF311, entrez=282890, pos=chr6:265991-28973093(-), B=189, L=178, M=186, H=171
28443 tcgaexp gene=OR2B3, entrez=442184, pos=chr6:357384-29055090(-), B=0, L=0, M=0, H=0
28443 tcgaexp gene=OR2J3, entrez=442186, pos=chr6:383070-29080603(+), B=0, L=0, M=1, H=1
28443 tcgaexp gene=OR14J1, entrez=442191, pos=chr6:577912-29275432(+), B=0, L=0, M=0, H=0