DMR Stats | |
---|---|
Position | chr9:112901-113100 (View on UCSC) |
Width | 200bp |
Genomic Context | intergenic |
Nearest Genes | FOXD4 (3130bp away) |
ANODEV p-value | 1.40724280761e-05 |
Frequencies | Benign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %) |
Frequent? |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
30190 | chr9 | 110917 | 112916 | cpgShore | — | values(x.gr)[overs$srow, ]:47574 |
30190 | chr9 | 112521 | 113030 | wgEncodeRegDnaseClusteredV2 | 16 | score:166, srow:1198073 |
30190 | chr9 | 112917 | 114839 | cpgIsland | CpG: 210 | length:1923, cpgNum:210, gcNum:1279, perCpg:21.8, perGc:66.5, obsExp:0.99, srow:26288 |
30190 | chr9 | 112640 | 115552 | wgEncodeRegTfbsClusteredV3 | EZH2 | score:734, expCount:10, expNums:6,15,17,19,21,25,36,38,40,43, expScores:407,255,201,186,321,262,210,203,235,374, srow:4111676 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
30190 | cellmeth_recounts | PrEC: 1, LNCaP: 150, DU145: 1 | |
30190 | cellmeth_diffreps_PrECvsLNCaP | A=1, B=1513, Length=2220, Event=Up, log2FC=10.56, padj=0 | |
30190 | cellmeth_diffreps_LNCaPvsDU145 | A=1617.47, B=5.61, Length=2220, Event=Down, log2FC=-8.17, padj=0 | |
30190 | cellexp | id=ENSG00000231808, name=RP11-143M1.4, PrEC=0, str=0, LNCaP=0, str=1, DU145=1, str=5 |