DMR 32977 chr14:95239351-95240650 (1300bp)

DMR Stats
Positionchr14:95239351-95240650 (View on UCSC)
Width1300bp
Genomic Contextintergenic
Nearest GenesGSC (2851bp away)
ANODEV p-value1.20534746205e-09
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
32977 chr14 95238212 95239375 cpgShore — values(x.gr)[overs$srow, ]:13461
32977 chr14 95239486 95239499 phastConsElements100way lod=45 score:370, srow:2861540
32977 chr14 95239518 95239524 phastConsElements100way lod=35 score:345, srow:2861541
32977 chr14 95239564 95239578 tfbsConsSites V$E2F_01 score:791, zScore:2.34, srow:1648479
32977 chr14 95239544 95239580 phastConsElements100way lod=224 score:529, srow:2861542
32977 chr14 95239291 95239600 wgEncodeRegTfbsClusteredV3 SUZ12 score:118, expCount:1, expNums:358, expScores:118, srow:1277463
32977 chr14 95239586 95239603 tfbsConsSites V$MIF1_01 score:781, zScore:1.99, srow:1648480
32977 chr14 95239587 95239603 tfbsConsSites V$RFX1_01 score:866, zScore:2.57, srow:1648481
32977 chr14 95239590 95239604 tfbsConsSites V$CDP_02 score:831, zScore:1.97, srow:1648482
32977 chr14 95239598 95239607 tfbsConsSites V$SOX5_01 score:957, zScore:2.24, srow:1648483
32977 chr14 95239583 95239621 phastConsElements100way lod=182 score:509, srow:2861543
32977 chr14 95239625 95239639 phastConsElements100way lod=128 score:474, srow:2861544
32977 chr14 95239654 95239661 phastConsElements100way lod=32 score:337, srow:2861545
32977 chr14 95239668 95239677 phastConsElements100way lod=40 score:359, srow:2861546
32977 chr14 95239376 95239679 cpgIsland CpG: 35 length:304, cpgNum:35, gcNum:197, perCpg:23, perGc:64.8, obsExp:1.1, srow:7330
32977 chr14 95239680 95239694 phastConsElements100way lod=62 score:402, srow:2861547
32977 chr14 95239687 95239696 tfbsConsSites V$FOXO1_01 score:957, zScore:1.8, srow:1648484
32977 chr14 95239688 95239698 tfbsConsSites V$FOXO4_01 score:961, zScore:2.52, srow:1648485
32977 chr14 95239397 95239720 wgEncodeRegTfbsClusteredV3 SP1 score:166, expCount:1, expNums:153, expScores:166, srow:1277464
32977 chr14 95239728 95239739 tfbsConsSites V$CDC5_01 score:857, zScore:2.43, srow:1648486
32977 chr14 95239728 95239751 tfbsConsSites V$BRACH_01 score:683, zScore:1.76, srow:1648487
32977 chr14 95239760 95239772 tfbsConsSites V$OCT_C score:825, zScore:2.06, srow:1648488
32977 chr14 95239699 95239783 phastConsElements100way lod=519 score:612, srow:2861548
32977 chr14 95239797 95239827 phastConsElements100way lod=144 score:485, srow:2861549
32977 chr14 95239830 95239842 phastConsElements100way lod=46 score:373, srow:2861550
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Omics Overlaps

Dmrid Omic Set Data Plot
32977 cellmeth_recounts PrEC: 7, LNCaP: 107, DU145: 99
32977 cellmeth_diffreps_PrECvsLNCaP A=10, B=61, Length=560, Event=Up, log2FC=2.61, padj=1.38026174005492e-08
32977 cellmeth_diffreps_PrECvsLNCaP A=0, B=18, Length=340, Event=Up, log2FC=Inf, padj=3.04238490738774e-05
32977 cellmeth_diffreps_PrECvsDU145 A=3, B=43, Length=520, Event=Up, log2FC=3.84, padj=1.21014621758047e-08
32977 cellmeth_diffreps_PrECvsDU145 A=0, B=17, Length=340, Event=Up, log2FC=Inf, padj=7.41301388411866e-05
32977 cellmeth_diffreps_LNCaPvsDU145 A=48.11, B=13.1, Length=220, Event=Down, log2FC=-1.88, padj=0.000653920563387995
32977 tcgameth site:cg01796166, B=0.27, L=0.59, H=0.56
32977 tcgameth site:cg02264229, B=0.6, L=0.76, H=0.77
32977 tcgameth site:cg04961582, B=0.42, L=0.72, H=0.69
32977 tcgameth site:cg08196032, B=0.23, L=0.5, H=0.52
32977 tcgameth site:cg10746936, B=0.28, L=0.69, H=0.64
32977 tcgameth site:cg14943113, B=0.21, L=0.47, H=0.49
32977 tcgameth site:cg19870698, B=0.15, L=0.49, H=0.51
32977 tcgameth site:cg26077454, B=0.33, L=0.57, H=0.58