DMR 26121 chr2:30453301-30454050 (750bp)
| DMR Stats | |
|---|---|
| Position | chr2:30453301-30454050 (View on UCSC) |
| Width | 750bp |
| Genomic Context | promoter |
| Nearest Genes | LBH (346bp away) |
| ANODEV p-value | 5.89698428977e-10 |
| Frequencies | Benign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 26121 | chr2 | 30453913 | 30454797 | wgEncodeRegTfbsClusteredV3 | PHF8 | score:1000, expCount:1, expNums:30, expScores:450, srow:2139059 |
| 26121 | chr2 | 30453567 | 30455655 | cpgIsland | CpG: 198 | length:2089, cpgNum:198, gcNum:1408, perCpg:19, perGc:67.4, obsExp:0.84, srow:14860 |
| 26121 | chr2 | 30453925 | 30455847 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:1000, expCount:50, expNums:32,61,62,78,104,105,123,124,130,131,146,147,206,207,228,229,256,259,275,283,306,307,308,326,328,330,332,334,336,338,340,366,461,465,520,521,522,523,525,563,564,583,585,596,599,602,610,619,622,637, expScores:721,321,316,1000,1000,562,1000,1000,1000,1000,695,269,528,613,900,1000,714,1000,804,339,277,1000,798,1000,198,1000,422,995,256,1000,206,273,474,299,889,809,941,926,1000,446,883,1000,197,222,1000,851,500,386,1000,767, srow:2139060 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 26121 | cellmeth_recounts | PrEC: 43, LNCaP: 150, DU145: 37 |  |
| 26121 | cellmeth_diffreps_PrECvsLNCaP | A=12, B=81, Length=600, Event=Up, log2FC=2.75, padj=3.72393279263042e-12 |  |
| 26121 | cellmeth_diffreps_PrECvsDU145 | A=45, B=12, Length=360, Event=Down, log2FC=-1.91, padj=0.000337295577540918 |  |
| 26121 | cellmeth_diffreps_LNCaPvsDU145 | A=137.91, B=23.39, Length=960, Event=Down, log2FC=-2.56, padj=0 |  |
| 26121 | tcgameth | site:cg03801871, B=0.58, L=0.74, H=0.73 |  |
| 26121 | tcgameth | site:cg04253876, B=0.38, L=0.56, H=0.56 |  |