DMR 30192 chr9:117501-118300 (800bp)

DMR Stats
Positionchr9:117501-118300 (View on UCSC)
Width800bp
Genomic Contextpromoter
Nearest GenesFOXD4 (0bp away)
ANODEV p-value1.52478218464e-05
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 5.0 (55.56 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
30192 FOXD4 29107 uc003zfz.4 chr9 116231 118417 - 800 100.0 0.06 0 47.88 E1 (100) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30192 chr9 116702 118177 cpgIsland CpG: 124 length:1476, cpgNum:124, gcNum:996, perCpg:16.8, perGc:67.5, obsExp:0.74, srow:26289
30192 chr9 118001 118330 wgEncodeRegDnaseClusteredV2 6 score:115, srow:1198080
30192 chr9 117481 117815 wgEncodeRegDnaseClusteredV2 11 score:243, srow:1198079
30192 chr9 118052 118053 phastConsElements100way lod=14 score:255, srow:9110761
30192 chr9 118068 118069 phastConsElements100way lod=14 score:255, srow:9110762
30192 chr9 118082 118083 phastConsElements100way lod=14 score:255, srow:9110763
30192 chr9 118228 118229 phastConsElements100way lod=14 score:255, srow:9110764
30192 chr9 117569 117570 phastConsElements100way lod=15 score:262, srow:9110747
30192 chr9 117506 117507 phastConsElements100way lod=16 score:268, srow:9110741
30192 chr9 117509 117510 phastConsElements100way lod=16 score:268, srow:9110742
30192 chr9 117812 117816 phastConsElements100way lod=17 score:274, srow:9110759
30192 chr9 117533 117534 phastConsElements100way lod=24 score:308, srow:9110744
30192 chr9 118025 118035 phastConsElements100way lod=26 score:316, srow:9110760
30192 chr9 117536 117537 phastConsElements100way lod=27 score:320, srow:9110745
30192 chr9 117743 117744 phastConsElements100way lod=34 score:343, srow:9110753
30192 chr9 117746 117755 phastConsElements100way lod=61 score:400, srow:9110754
30192 chr9 117806 117810 phastConsElements100way lod=76 score:422, srow:9110758
30192 chr9 117605 117618 phastConsElements100way lod=91 score:440, srow:9110749
30192 chr9 117797 117804 phastConsElements100way lod=98 score:447, srow:9110757
30192 chr9 117788 117795 phastConsElements100way lod=111 score:460, srow:9110756
30192 chr9 117513 117530 phastConsElements100way lod=116 score:464, srow:9110743
30192 chr9 116265 118599 wgEncodeRegTfbsClusteredV3 EZH2 score:515, expCount:6, expNums:6,21,36,38,40,43, expScores:266,504,228,218,241,262, srow:4111683
30192 chr9 117539 117564 phastConsElements100way lod=287 score:554, srow:9110746
30192 chr9 117758 117786 phastConsElements100way lod=319 score:564, srow:9110755
30192 chr9 117575 117603 phastConsElements100way lod=339 score:570, srow:9110748
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  • 25 of 99 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
30192 cellmeth_recounts PrEC: 24, LNCaP: 193, DU145: 15
30192 cellmeth_diffreps_PrECvsLNCaP A=2, B=89, Length=760, Event=Up, log2FC=5.48, padj=0
30192 cellmeth_diffreps_PrECvsLNCaP A=24, B=56, Length=260, Event=Up, log2FC=1.22, padj=0.008870036705605
30192 cellmeth_diffreps_PrECvsDU145 A=25, B=4, Length=340, Event=Down, log2FC=-2.64, padj=0.00160404022456948
30192 cellmeth_diffreps_PrECvsDU145 A=28, B=3, Length=320, Event=Down, log2FC=-3.22, padj=8.63344400735211e-05
30192 cellmeth_diffreps_LNCaPvsDU145 A=192.43, B=12.16, Length=1280, Event=Down, log2FC=-3.98, padj=0
30192 cellexp id=ENSG00000170122, name=FOXD4, PrEC=3, str=21, LNCaP=465, str=274, DU145=47, str=57
30192 tcgameth site:cg18016181, B=0.24, L=0.58, H=0.59
30192 tcgameth site:cg25391162, B=0.5, L=0.64, H=0.64
30192 tcgaexp gene=FOXD4, entrez=2298, pos=chr9:116231-118417(-), B=18, L=37, M=34, H=39