DMR 32899 chr14:73958951-73959300 (350bp)
| DMR Stats | |
|---|---|
| Position | chr14:73958951-73959300 (View on UCSC) |
| Width | 350bp |
| Genomic Context | 3' end |
| Nearest Genes | C14orf169, HEATR4 (0bp away) |
| ANODEV p-value | 1.82180519517e-08 |
| Frequencies | Benign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32899 | C14orf169 | 8427 | uc001xok.1 | chr14 | 73957644 | 73960105 | + | 350 | 100.0 | 11.33 | 0 | 0.0 | E1 (0), I1 (0), E2 (100) | 55.71 |
| 32899 | HEATR4 | 8426 | uc021rwe.1 | chr14 | 73945189 | 74025651 | - | 350 | 100.0 | 9.26 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (100), E18 (0) | 0.0 |
| 32899 | HEATR4 | 8426 | uc021rwf.2 | chr14 | 73945189 | 74025651 | - | 350 | 100.0 | 18.52 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (100), E17 (0) | 0.0 |
- 3 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 32899 | chr14 | 73959147 | 73959148 | phastConsElements100way | lod=12 | score:240, srow:2781605 |
| 32899 | chr14 | 73959292 | 73959292 | phastConsElements100way | lod=12 | score:240, srow:2781616 |
| 32899 | chr14 | 73959267 | 73959268 | phastConsElements100way | lod=15 | score:262, srow:2781613 |
| 32899 | chr14 | 73958958 | 73958958 | phastConsElements100way | lod=17 | score:274, srow:2781585 |
| 32899 | chr14 | 73959073 | 73959073 | phastConsElements100way | lod=23 | score:304, srow:2781597 |
| 32899 | chr14 | 73959138 | 73959139 | phastConsElements100way | lod=27 | score:320, srow:2781603 |
| 32899 | chr14 | 73959255 | 73959256 | phastConsElements100way | lod=28 | score:323, srow:2781611 |
| 32899 | chr14 | 73959028 | 73959031 | phastConsElements100way | lod=30 | score:330, srow:2781591 |
| 32899 | chr14 | 73959034 | 73959037 | phastConsElements100way | lod=30 | score:330, srow:2781592 |
| 32899 | chr14 | 73958955 | 73958956 | phastConsElements100way | lod=31 | score:333, srow:2781584 |
| 32899 | chr14 | 73958921 | 73959375 | wgEncodeRegDnaseClusteredV2 | 8 | score:342, srow:364724 |
| 32899 | chr14 | 73959141 | 73959144 | phastConsElements100way | lod=35 | score:345, srow:2781604 |
| 32899 | chr14 | 73959048 | 73959049 | phastConsElements100way | lod=36 | score:348, srow:2781594 |
| 32899 | chr14 | 73959123 | 73959124 | phastConsElements100way | lod=38 | score:354, srow:2781601 |
| 32899 | chr14 | 73959294 | 73959301 | phastConsElements100way | lod=46 | score:373, srow:2781617 |
| 32899 | chr14 | 73959285 | 73959289 | phastConsElements100way | lod=48 | score:377, srow:2781615 |
| 32899 | chr14 | 73959198 | 73959202 | phastConsElements100way | lod=53 | score:387, srow:2781608 |
| 32899 | chr14 | 73959270 | 73959280 | phastConsElements100way | lod=54 | score:388, srow:2781614 |
| 32899 | chr14 | 73958961 | 73958965 | phastConsElements100way | lod=57 | score:394, srow:2781586 |
| 32899 | chr14 | 73959258 | 73959265 | phastConsElements100way | lod=57 | score:394, srow:2781612 |
| 32899 | chr14 | 73959040 | 73959046 | phastConsElements100way | lod=63 | score:404, srow:2781593 |
| 32899 | chr14 | 73959076 | 73959082 | phastConsElements100way | lod=66 | score:408, srow:2781598 |
| 32899 | chr14 | 73959129 | 73959136 | phastConsElements100way | lod=66 | score:408, srow:2781602 |
| 32899 | chr14 | 73958980 | 73958986 | phastConsElements100way | lod=74 | score:420, srow:2781588 |
| 32899 | chr14 | 73959063 | 73959070 | phastConsElements100way | lod=94 | score:443, srow:2781596 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 32899 | cellmeth_recounts | PrEC: 28, LNCaP: 202, DU145: 12 |  |
| 32899 | cellmeth_diffreps_PrECvsLNCaP | A=51, B=4784, Length=2580, Event=Up, log2FC=6.55, padj=0 |  |
| 32899 | cellmeth_diffreps_PrECvsDU145 | A=42, B=8, Length=360, Event=Down, log2FC=-2.39, padj=3.26137154746126e-05 |  |
| 32899 | cellmeth_diffreps_LNCaPvsDU145 | A=5114.31, B=28.06, Length=2520, Event=Down, log2FC=-7.51, padj=0 |  |
| 32899 | cellexp | id=ENSG00000170468, name=AC005280.1, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0 |  |
| 32899 | cellexp | id=ENSG00000187105, name=HEATR4, PrEC=9, str=34, LNCaP=1, str=0, DU145=43, str=32 |  |
| 32899 | cellexp | id=ENSG00000255242, name=C14orf169, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0 |  |
| 32899 | tcgaexp | gene=HEATR4, entrez=399671, pos=chr14:73945189-74025651(-), B=15, L=10, M=12, H=14 |  |