DMR Stats | |
---|---|
Position | chr16:521251-521400 (View on UCSC) |
Width | 150bp |
Genomic Context | exon |
Nearest Genes | RAB11FIP3 (0bp away) |
ANODEV p-value | 0.000495567267272 |
Frequencies | Benign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
33468 | RAB11FIP3 | 10676 | uc002chf.3 | chr16 | 475668 | 572481 | + | 150 | 100.0 | 4.56 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (29.33), E3 (63.33), I3 (8), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
33468 | chr16 | 520808 | 521302 | oreganno | OREG0003708 | id:OREG0003708, srow:8402 |
33468 | chr16 | 521146 | 522090 | wgEncodeRegDnaseClusteredV2 | 60 | score:1000, srow:427496 |
33468 | chr16 | 521393 | 521676 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:125, expCount:1, expNums:599, expScores:125, srow:1442889 |
33468 | chr16 | 521267 | 521272 | phastConsElements100way | lod=13 | score:247, srow:3212456 |
33468 | chr16 | 521292 | 521295 | phastConsElements100way | lod=30 | score:330, srow:3212457 |
33468 | chr16 | 521339 | 521343 | phastConsElements100way | lod=30 | score:330, srow:3212459 |
33468 | chr16 | 521300 | 521313 | phastConsElements100way | lod=34 | score:343, srow:3212458 |
33468 | chr16 | 521351 | 521396 | phastConsElements100way | lod=195 | score:515, srow:3212460 |
33468 | chr16 | 521373 | 521396 | tfbsConsSites | V$BRACH_01 | score:728, zScore:2.69, srow:1868736 |
33468 | chr16 | 521374 | 521392 | tfbsConsSites | V$PAX2_01 | score:835, zScore:3.12, srow:1868737 |
33468 | chr16 | 521373 | 521383 | tfbsConsSites | V$AP1FJ_Q2 | score:927, zScore:2.06, srow:1868735 |
33468 | chr16 | 521297 | 521306 | tfbsConsSites | V$GATA1_01 | score:944, zScore:1.8, srow:1868734 |
33468 | chr16 | 521390 | 521396 | tfbsConsSites | V$NKX25_01 | score:948, zScore:1.73, srow:1868738 |
33468 | chr16 | 521301 | 521301 | cosmic | COSM471808 | srow:419626 |
33468 | chr16 | 521368 | 521368 | cosmic | COSM971370 | srow:419627 |