DMR 33558 chr16:8806501-8807000 (500bp)

DMR Stats
Positionchr16:8806501-8807000 (View on UCSC)
Width500bp
Genomic Contextpromoter
Nearest GenesABAT (0bp away)
ANODEV p-value2.10773639929e-07
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
33558 ABAT 10923 uc002czc.4 chr16 8768444 8878432 + 500 100.0 2.55 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) 0.0
33558 ABAT 10923 uc002czd.4 chr16 8806826 8878432 + 175 35.0 0.36 0 100.0 E1 (35), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) 0.0
33558 ABAT 10923 uc010buh.3 chr16 8806826 8878432 + 175 35.0 0.6 0 100.0 E1 (35), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33558 chr16 8806491 8806761 wgEncodeRegTfbsClusteredV3 GATA2 score:1000, expCount:1, expNums:586, expScores:1000, srow:1464405
33558 chr16 8806620 8806627 tfbsConsSites V$STAT4_01 score:1000, zScore:1.65, srow:1893199
33558 chr16 8806538 8806867 wgEncodeRegTfbsClusteredV3 MAX score:135, expCount:1, expNums:352, expScores:135, srow:1464406
33558 chr16 8806629 8806904 wgEncodeRegTfbsClusteredV3 USF2 score:168, expCount:1, expNums:360, expScores:168, srow:1464407
33558 chr16 8806779 8807042 wgEncodeRegTfbsClusteredV3 CEBPB score:206, expCount:1, expNums:343, expScores:206, srow:1464409
33558 chr16 8806733 8806735 phastConsElements100way lod=13 score:247, srow:3253844
33558 chr16 8806515 8806519 phastConsElements100way lod=14 score:255, srow:3253835
33558 chr16 8806747 8806752 phastConsElements100way lod=14 score:255, srow:3253845
33558 chr16 8806906 8807142 wgEncodeRegTfbsClusteredV3 CTCF score:273, expCount:5, expNums:174,628,629,630,631, expScores:129,250,273,241,213, srow:1464411
33558 chr16 8806256 8806739 wgEncodeRegTfbsClusteredV3 GATA3 score:293, expCount:1, expNums:587, expScores:293, srow:1464404
33558 chr16 8806719 8806725 phastConsElements100way lod=21 score:295, srow:3253843
33558 chr16 8806548 8806558 phastConsElements100way lod=22 score:300, srow:3253836
33558 chr16 8806711 8806714 phastConsElements100way lod=24 score:308, srow:3253842
33558 chr16 8806875 8807129 wgEncodeRegTfbsClusteredV3 RAD21 score:343, expCount:4, expNums:149,193,264,355, expScores:343,241,169,147, srow:1464410
33558 chr16 8806572 8806582 phastConsElements100way lod=40 score:359, srow:3253837
33558 chr16 8806676 8806689 phastConsElements100way lod=56 score:392, srow:3253840
33558 chr16 8806693 8806704 phastConsElements100way lod=61 score:400, srow:3253841
33558 chr16 8806656 8806673 phastConsElements100way lod=101 score:450, srow:3253839
33558 chr16 8806757 8806779 phastConsElements100way lod=105 score:454, srow:3253846
33558 chr16 8806686 8806812 wgEncodeRegTfbsClusteredV3 USF1 score:556, expCount:2, expNums:161,265, expScores:486,556, srow:1464408
33558 chr16 8806596 8806652 phastConsElements100way lod=312 score:562, srow:3253838
33558 chr16 8806601 8807035 wgEncodeRegDnaseClusteredV2 15 score:734, srow:432648
33558 chr16 8806606 8806627 tfbsConsSites V$MEF2_03 score:774, zScore:1.69, srow:1893195
33558 chr16 8806558 8806581 tfbsConsSites V$HTF_01 score:777, zScore:2, srow:1893191
33558 chr16 8806611 8806625 tfbsConsSites V$CDP_02 score:818, zScore:1.75, srow:1893197
  • Page 1 of 2
  • 25 of 35 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33558 cellmeth_recounts PrEC: 12, LNCaP: 0, DU145: 5
33558 cellmeth_diffreps_PrECvsLNCaP A=12, B=0, Length=300, Event=Down, log2FC=-Inf, padj=0.00157949948552458
33558 cellexp id=ENSG00000183044, name=ABAT, PrEC=1039, str=1896, LNCaP=2957, str=4501, DU145=276, str=56
33558 tcgameth site:cg00220102, B=0.51, L=0.74, H=0.73
33558 tcgameth site:cg00231389, B=0.32, L=0.56, H=0.56
33558 tcgameth site:cg01881182, B=0.63, L=0.81, H=0.8
33558 tcgameth site:cg08241330, B=0.57, L=0.73, H=0.73
33558 tcgameth site:cg08834902, B=0.56, L=0.72, H=0.72
33558 tcgameth site:cg16586594, B=0.51, L=0.72, H=0.72
33558 tcgameth site:cg26778345, B=0.35, L=0.65, H=0.62
33558 tcgaexp gene=ABAT, entrez=18, pos=chr16:8768444-8878432(+), B=5178, L=7494, M=7026, H=5106