DMR 9057 chr19:43979551-43979750 (200bp)

DMR Stats
Positionchr19:43979551-43979750 (View on UCSC)
Width200bp
Genomic Context3' end
Nearest GenesPHLDB3 (0bp away)
ANODEV p-value0.00565744636284
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
9057 PHLDB3 15246 uc002own.4 chr19 43979255 44008985 - 200 100.0 0.45 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (27.5), E16 (73) 100.0
9057 PHLDB3 15246 uc010eit.3 chr19 43979255 43999846 - 200 100.0 0.45 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (27.5), E10 (73) 100.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
9057 chr19 43979360 43979684 cpgIsland CpG: 28 length:325, cpgNum:28, gcNum:193, perCpg:17.2, perGc:59.4, obsExp:0.99, srow:13857
9057 chr19 43979539 43979905 wgEncodeRegTfbsClusteredV3 PHF8 score:1000, expCount:1, expNums:30, expScores:1000, srow:2032301
9057 chr19 43979447 43979726 wgEncodeRegTfbsClusteredV3 CREB1 score:1000, expCount:1, expNums:47, expScores:1000, srow:2032296
9057 chr19 43979374 43979641 wgEncodeRegTfbsClusteredV3 EGR1 score:1000, expCount:3, expNums:87,138,216, expScores:977,1000,1000, srow:2032282
9057 chr19 43978991 43980073 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:40, expNums:32,61,62,78,105,146,163,168,206,207,228,229,259,328,330,334,336,338,340,362,366,402,461,465,520,521,522,523,524,525,526,563,564,583,596,610,613,619,622,637, expScores:222,748,531,349,552,410,577,300,193,268,322,1000,283,250,191,175,245,184,232,180,165,547,128,321,467,516,582,653,186,454,357,478,446,586,352,168,213,125,432,145, srow:2032256
9057 chr19 43979409 43979827 wgEncodeRegTfbsClusteredV3 MAX score:1000, expCount:6, expNums:223,278,352,395,460,511, expScores:1000,303,143,214,122,563, srow:2032290
9057 chr19 43979261 43979755 wgEncodeRegDnaseClusteredV2 119 score:1000, srow:582215
9057 chr19 43979340 43979619 wgEncodeRegTfbsClusteredV3 ZBTB33 score:128, expCount:1, expNums:165, expScores:128, srow:2032273
9057 chr19 43979319 43979694 wgEncodeRegTfbsClusteredV3 TCF7L2 score:138, expCount:1, expNums:363, expScores:138, srow:2032267
9057 chr19 43979463 43979741 wgEncodeRegTfbsClusteredV3 NRF1 score:141, expCount:2, expNums:303,518, expScores:141,102, srow:2032298
9057 chr19 43979358 43979661 wgEncodeRegTfbsClusteredV3 FOXP2 score:149, expCount:1, expNums:251, expScores:149, srow:2032276
9057 chr19 43979375 43979654 wgEncodeRegTfbsClusteredV3 PAX5 score:160, expCount:1, expNums:129, expScores:160, srow:2032283
9057 chr19 43979332 43979641 wgEncodeRegTfbsClusteredV3 BRCA1 score:164, expCount:1, expNums:342, expScores:164, srow:2032271
9057 chr19 43979426 43979675 wgEncodeRegTfbsClusteredV3 FOS score:173, expCount:1, expNums:557, expScores:173, srow:2032293
9057 chr19 43979472 43979827 wgEncodeRegTfbsClusteredV3 TAF7 score:187, expCount:1, expNums:158, expScores:187, srow:2032299
9057 chr19 43979262 43979757 wgEncodeRegTfbsClusteredV3 HMGN3 score:188, expCount:1, expNums:501, expScores:188, srow:2032262
9057 chr19 43979439 43979794 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:193, expCount:1, expNums:260, expScores:193, srow:2032295
9057 chr19 43979323 43979572 wgEncodeRegTfbsClusteredV3 TEAD4 score:201, expCount:1, expNums:160, expScores:201, srow:2032269
9057 chr19 43979433 43979696 wgEncodeRegTfbsClusteredV3 CEBPB score:209, expCount:1, expNums:378, expScores:209, srow:2032294
9057 chr19 43979209 43979748 wgEncodeRegTfbsClusteredV3 GABPA score:214, expCount:1, expNums:54, expScores:214, srow:2032259
9057 chr19 43979366 43979793 wgEncodeRegTfbsClusteredV3 RELA score:226, expCount:2, expNums:325,329, expScores:226,177, srow:2032279
9057 chr19 43979299 43979693 wgEncodeRegTfbsClusteredV3 CHD2 score:230, expCount:2, expNums:345,380, expScores:230,150, srow:2032264
9057 chr19 43979321 43979821 wgEncodeRegTfbsClusteredV3 REST score:235, expCount:4, expNums:189,226,257,274, expScores:160,235,172,179, srow:2032268
9057 chr19 43979315 43979718 wgEncodeRegTfbsClusteredV3 ZBTB7A score:251, expCount:1, expNums:247, expScores:251, srow:2032266
9057 chr19 43979245 43979854 wgEncodeRegTfbsClusteredV3 SP4 score:253, expCount:1, expNums:155, expScores:253, srow:2032260
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  • 25 of 72 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
9057 cellmeth_recounts PrEC: 2, LNCaP: 5, DU145: 1
9057 cellexp id=ENSG00000176531, name=PHLDB3, PrEC=618, str=880, LNCaP=630, str=330, DU145=475, str=327
9057 tcgameth site:cg18851960, B=0.43, L=0.46, H=0.4
9057 tcgaexp gene=PHLDB3, entrez=653583, pos=chr19:43979255-44008985(-), B=1136, L=1856, M=1726, H=1530