DMR 26121 chr2:30453301-30454050 (750bp)
| DMR Stats | |
|---|---|
| Position | chr2:30453301-30454050 (View on UCSC) |
| Width | 750bp |
| Genomic Context | promoter |
| Nearest Genes | LBH (346bp away) |
| ANODEV p-value | 5.89698428977e-10 |
| Frequencies | Benign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 26121 | chr2 | 30453326 | 30454095 | wgEncodeRegDnaseClusteredV2 | 68 | score:714, srow:610408 |
| 26121 | chr2 | 30453269 | 30453519 | wgEncodeRegTfbsClusteredV3 | RAD21 | score:738, expCount:4, expNums:108,149,231,264, expScores:162,279,166,738, srow:2139048 |
| 26121 | chr2 | 30451567 | 30453566 | cpgShore | — | values(x.gr)[overs$srow, ]:26721 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 26121 | cellmeth_recounts | PrEC: 43, LNCaP: 150, DU145: 37 |  |
| 26121 | cellmeth_diffreps_PrECvsLNCaP | A=12, B=81, Length=600, Event=Up, log2FC=2.75, padj=3.72393279263042e-12 |  |
| 26121 | cellmeth_diffreps_PrECvsDU145 | A=45, B=12, Length=360, Event=Down, log2FC=-1.91, padj=0.000337295577540918 |  |
| 26121 | cellmeth_diffreps_LNCaPvsDU145 | A=137.91, B=23.39, Length=960, Event=Down, log2FC=-2.56, padj=0 |  |
| 26121 | tcgameth | site:cg03801871, B=0.58, L=0.74, H=0.73 |  |
| 26121 | tcgameth | site:cg04253876, B=0.38, L=0.56, H=0.56 |  |