DMR 29893 chr8:49468251-49469100 (850bp)

DMR Stats
Positionchr8:49468251-49469100 (View on UCSC)
Width850bp
Genomic Contextintergenic
Nearest GenesEFCAB1 (154250bp away)
ANODEV p-value4.33801143155e-12
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
29893 chr8 49468463 49468488 phastConsElements100way lod=146 score:487, srow:8825227
29893 chr8 49468761 49469470 wgEncodeRegDnaseClusteredV2 67 score:490, srow:1158858
29893 chr8 49468492 49468517 phastConsElements100way lod=195 score:515, srow:8825228
29893 chr8 49469014 49469059 phastConsElements100way lod=268 score:547, srow:8825236
29893 chr8 49468521 49468664 phastConsElements100way lod=733 score:647, srow:8825229
29893 chr8 49468774 49468941 phastConsElements100way lod=1608 score:724, srow:8825232
29893 chr8 49468320 49468348 tfbsConsSites V$MYOGNF1_01 score:733, zScore:1.64, srow:5105199
29893 chr8 49468873 49468894 tfbsConsSites V$TCF11MAFG_01 score:747, zScore:1.76, srow:5105225
29893 chr8 49468846 49468863 tfbsConsSites V$SRF_01 score:771, zScore:2.53, srow:5105222
29893 chr8 49468656 49468669 tfbsConsSites V$POU3F2_01 score:791, zScore:1.74, srow:5105216
29893 chr8 49468490 49468504 tfbsConsSites V$HNF1_01 score:798, zScore:1.67, srow:5105208
29893 chr8 49468575 49468596 tfbsConsSites V$MEF2_03 score:800, zScore:2.1, srow:5105213
29893 chr8 49468952 49468970 tfbsConsSites V$AHRARNT_02 score:808, zScore:2.36, srow:5105226
29893 chr8 49468847 49468862 tfbsConsSites V$FREAC3_01 score:809, zScore:1.85, srow:5105223
29893 chr8 49468636 49468650 tfbsConsSites V$HNF1_01 score:816, zScore:1.98, srow:5105215
29893 chr8 49469025 49469040 tfbsConsSites V$FREAC2_01 score:817, zScore:1.81, srow:5105228
29893 chr8 49468573 49468587 tfbsConsSites V$CDPCR3_01 score:822, zScore:2.42, srow:5105212
29893 chr8 49469027 49469040 tfbsConsSites V$FOXO4_02 score:824, zScore:1.82, srow:5105233
29893 chr8 49468497 49468510 tfbsConsSites V$CHX10_01 score:827, zScore:2.12, srow:5105211
29893 chr8 49469027 49469040 tfbsConsSites V$FOXO3_01 score:835, zScore:1.87, srow:5105232
29893 chr8 49469027 49469040 tfbsConsSites V$FOXO1_02 score:839, zScore:2.28, srow:5105231
29893 chr8 49468310 49468324 tfbsConsSites V$OCT1_Q6 score:855, zScore:2.03, srow:5105198
29893 chr8 49468796 49468805 tfbsConsSites V$NFKAPPAB50_01 score:861, zScore:1.73, srow:5105219
29893 chr8 49468339 49468354 tfbsConsSites V$GRE_C score:861, zScore:2.72, srow:5105200
29893 chr8 49468339 49468354 tfbsConsSites V$TAL1BETAITF2_01 score:863, zScore:2.01, srow:5105202

Omics Overlaps

Dmrid Omic Set Data Plot
29893 cellmeth_recounts PrEC: 3, LNCaP: 396, DU145: 28
29893 cellmeth_diffreps_PrECvsLNCaP A=4, B=318, Length=1100, Event=Up, log2FC=6.31, padj=0
29893 cellmeth_diffreps_LNCaPvsDU145 A=35.28, B=0.94, Length=400, Event=Down, log2FC=-5.24, padj=4.08953502356965e-08
29893 cellmeth_diffreps_LNCaPvsDU145 A=304.68, B=18.71, Length=660, Event=Down, log2FC=-4.03, padj=0
29893 cellexp id=ENSG00000253608, name=RP11-770E5.1, PrEC=8, str=27, LNCaP=0, str=0, DU145=0, str=0
29893 cellexp id=ENSG00000253688, name=RP11-567J20.2, PrEC=1, str=0, LNCaP=0, str=0, DU145=0, str=0
29893 tcgameth site:cg04920358, B=0.07, L=0.47, H=0.4
29893 tcgameth site:cg10826197, B=0.03, L=0.33, H=0.38
29893 tcgameth site:cg14095438, B=0.16, L=0.56, H=0.51
29893 tcgameth site:cg14907769, B=0.18, L=0.62, H=0.57
29893 tcgameth site:cg18991611, B=0.07, L=0.59, H=0.54
29893 tcgameth site:cg19414967, B=0.33, L=0.67, H=0.66
29893 tcgameth site:cg20527270, B=0.1, L=0.67, H=0.56
29893 tcgameth site:cg27038634, B=0.27, L=0.55, H=0.55