DMR 52493 chrY:14107551-14107900 (350bp)

DMR Stats
PositionchrY:14107551-14107900 (View on UCSC)
Width350bp
Genomic Contextintergenic
Nearest GenesGYG2P1 (410014bp away)
ANODEV p-value0.00713659423495
FrequenciesBenign: 5.0 (71.43%), Low: 6.0 (100.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52493 chrY 14107835 14107839 phastConsElements100way lod=30 score:330, srow:10103787
52493 chrY 14107697 14107700 phastConsElements100way lod=31 score:333, srow:10103764
52493 chrY 14107569 14107575 phastConsElements100way lod=33 score:340, srow:10103751
52493 chrY 14107664 14107668 phastConsElements100way lod=34 score:343, srow:10103761
52493 chrY 14107622 14107628 phastConsElements100way lod=35 score:345, srow:10103754
52493 chrY 14107661 14107662 phastConsElements100way lod=35 score:345, srow:10103760
52493 chrY 14107757 14107758 phastConsElements100way lod=35 score:345, srow:10103773
52493 chrY 14107577 14107581 phastConsElements100way lod=37 score:351, srow:10103752
52493 chrY 14107562 14107565 phastConsElements100way lod=39 score:356, srow:10103750
52493 chrY 14107781 14107785 phastConsElements100way lod=39 score:356, srow:10103776
52493 chrY 14107847 14107850 phastConsElements100way lod=39 score:356, srow:10103789
52493 chrY 14107817 14107821 phastConsElements100way lod=40 score:359, srow:10103784
52493 chrY 14107736 14107742 phastConsElements100way lod=49 score:379, srow:10103770
52493 chrY 14107883 14107893 phastConsElements100way lod=51 score:383, srow:10103794
52493 chrY 14107895 14107899 phastConsElements100way lod=53 score:387, srow:10103795
52493 chrY 14107682 14107686 phastConsElements100way lod=55 score:390, srow:10103762
52493 chrY 14107863 14107869 phastConsElements100way lod=61 score:400, srow:10103792
52493 chrY 14107808 14107815 phastConsElements100way lod=67 score:410, srow:10103783
52493 chrY 14107616 14107620 phastConsElements100way lod=74 score:420, srow:10103753
52493 chrY 14107872 14107881 phastConsElements100way lod=94 score:443, srow:10103793
52493 chrY 14107542 14107560 phastConsElements100way lod=108 score:457, srow:10103749
52493 chrY 14107712 14107725 phastConsElements100way lod=109 score:458, srow:10103768
52493 chrY 14107481 14109480 cpgShore — values(x.gr)[overs$srow, ]:51833

Omics Overlaps

Dmrid Omic Set Data Plot
52493 cellmeth_recounts PrEC: 17, LNCaP: 0, DU145: 0
52493 cellmeth_diffreps_PrECvsLNCaP A=42, B=0, Length=800, Event=Down, log2FC=-Inf, padj=2.47189879700585e-12
52493 cellmeth_diffreps_PrECvsDU145 A=42, B=0, Length=780, Event=Down, log2FC=-Inf, padj=3.40043484300421e-12
52493 cellexp id=ENSG00000235649, name=MXRA5P1, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0