DMR Stats | |
---|---|
Position | chr1:165777301-165777450 (View on UCSC) |
Width | 150bp |
Genomic Context | intron |
Nearest Genes | TMCO1 (0bp away) |
ANODEV p-value | 0.00481399646266 |
Frequencies | Benign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 2.0 (22.22 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
505 | TMCO1 | 2080 | uc001gdn.4 | chr1 | 165693528 | 165796992 | - | 150 | 100.0 | 0.13 | 1 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
505 | chr1 | 165777293 | 165777305 | phastConsElements100way | lod=23 | score:304, srow:594913 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
505 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 4 | |
505 | cellexp | id=ENSG00000143183, name=TMCO1, PrEC=4149, str=12780, LNCaP=6495, str=9077, DU145=4187, str=6158 | |
505 | tcgaexp | gene=TMCO1, entrez=54499, pos=chr1:165693528-165796992(-), B=6845, L=5970, M=6204, H=6499 | |
505 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |