DMR Stats | |
---|---|
Position | chr17:105551-105900 (View on UCSC) |
Width | 350bp |
Genomic Context | intron |
Nearest Genes | RPH3AL (0bp away) |
ANODEV p-value | 0.00142649427923 |
Frequencies | Benign: 4.0 (57.14%), Low: 6.0 (100.0%), High: 8.0 (88.89 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8083 | RPH3AL | 11877 | uc010vpy.2 | chr17 | 62180 | 177370 | - | 350 | 100.0 | 0.43 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) | 0.0 |
8083 | RPH3AL | 11877 | uc002fre.2 | chr17 | 62180 | 202633 | - | 350 | 100.0 | 0.32 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) | 0.0 |
8083 | RPH3AL | 11877 | uc002frf.2 | chr17 | 62180 | 202633 | - | 350 | 100.0 | 0.32 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
8083 | RPH3AL | 11877 | uc010cjl.2 | chr17 | 62180 | 202633 | - | 350 | 100.0 | 0.32 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) | 0.0 |
8083 | RPH3AL | 11877 | uc021tmx.1 | chr17 | 62180 | 202633 | - | 350 | 100.0 | 0.43 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
8083 | cellmeth_recounts | PrEC: 37, LNCaP: 11, DU145: 15 | |
8083 | cellmeth_diffreps_PrECvsLNCaP | A=157, B=14, Length=800, Event=Down, log2FC=-3.49, padj=0 | |
8083 | cellmeth_diffreps_PrECvsDU145 | A=157, B=41, Length=720, Event=Down, log2FC=-1.94, padj=0 | |
8083 | cellmeth_diffreps_LNCaPvsDU145 | A=5.35, B=31.8, Length=300, Event=Up, log2FC=2.57, padj=0.000802664937158908 | |
8083 | cellexp | id=ENSG00000181031, name=RPH3AL, PrEC=139, str=116, LNCaP=825, str=593, DU145=1180, str=616 | |
8083 | tcgameth | site:cg06324707, B=0.94, L=0.94, H=0.93 | |
8083 | tcgaexp | gene=RPH3AL, entrez=9501, pos=chr17:62180-202633(-), B=579, L=622, M=682, H=475 | |
8083 | tcgaexp | gene=ARHGAP27, entrez=201176, pos=chr17:86404-43511112(-), B=1570, L=1264, M=1273, H=1486 |