DMR Stats | |
---|---|
Position | chr4:206801-207000 (View on UCSC) |
Width | 200bp |
Genomic Context | promoter |
Nearest Genes | ZNF876P (0bp away) |
ANODEV p-value | 3.78439563695e-05 |
Frequencies | Benign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
37725 | ZNF876P | 21254 | uc010iba.4 | chr4 | 206389 | 249773 | + | 200 | 100.0 | 0.07 | 0 | 44.0 | E1 (0), I1 (100), E2 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
37725 | chr4 | 206746 | 207275 | wgEncodeRegDnaseClusteredV2 | 30 | score:358, srow:864267 |
37725 | chr4 | 206131 | 206804 | wgEncodeRegTfbsClusteredV3 | YY1 | score:204, expCount:3, expNums:162,266,579, expScores:204,193,120, srow:2988468 |
37725 | chr4 | 206378 | 206892 | cpgIsland | CpG: 49 | length:515, cpgNum:49, gcNum:349, perCpg:19, perGc:67.8, obsExp:0.83, srow:19333 |
37725 | chr4 | 206893 | 208892 | cpgShore | — | values(x.gr)[overs$srow, ]:34974 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
37725 | cellmeth_recounts | PrEC: 0, LNCaP: 3, DU145: 8 | |
37725 | cellexp | id=ENSG00000198155, name=ZNF876P, PrEC=80, str=78, LNCaP=23, str=22, DU145=58, str=55 | |
37725 | tcgaexp | gene=YTHDC1, entrez=91746, pos=chr4:6027-69215824(-), B=4512, L=3976, M=4109, H=4458 | |
37725 | tcgaexp | gene=ZNF876P, entrez=642280, pos=chr4:206389-249773(+), B=45, L=47, M=44, H=53 | |
37725 | tcgaexp | gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0 | |
37725 | pubmed | gene=ZNF876P, G=0, GP=0, GC=0, GM=0, GPM=0, GCM=0 |