DMR 34823 chr19:566351-567000 (650bp)

DMR Stats
Positionchr19:566351-567000 (View on UCSC)
Width650bp
Genomic Contextintergenic
Nearest GenesBSG (4276bp away)
ANODEV p-value0.0011006113741
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
34823 chr19 566881 567110 wgEncodeRegDnaseClusteredV2 2 score:246, srow:555892
34823 chr19 566481 566715 wgEncodeRegDnaseClusteredV2 41 score:1000, srow:555891
34823 chr19 566397 566730 wgEncodeRegTfbsClusteredV3 BHLHE40 score:491, expCount:2, expNums:423,472, expScores:183,491, srow:1908271
34823 chr19 566538 566655 wgEncodeRegTfbsClusteredV3 CBX3 score:418, expCount:1, expNums:211, expScores:418, srow:1908296
34823 chr19 566439 566894 wgEncodeRegTfbsClusteredV3 CCNT2 score:133, expCount:1, expNums:476, expScores:133, srow:1908281
34823 chr19 566433 566700 wgEncodeRegTfbsClusteredV3 CEBPB score:1000, expCount:6, expNums:172,212,378,425,426,477, expScores:416,1000,184,554,1000,1000, srow:1908279
34823 chr19 566449 566724 wgEncodeRegTfbsClusteredV3 CEBPD score:243, expCount:1, expNums:173, expScores:243, srow:1908283
34823 chr19 566497 566832 wgEncodeRegTfbsClusteredV3 E2F4 score:258, expCount:1, expNums:494, expScores:258, srow:1908290
34823 chr19 566513 566754 wgEncodeRegTfbsClusteredV3 E2F6 score:500, expCount:2, expNums:215,495, expScores:500,354, srow:1908292
34823 chr19 566529 566772 wgEncodeRegTfbsClusteredV3 EGR1 score:225, expCount:1, expNums:216, expScores:225, srow:1908295
34823 chr19 566521 566796 wgEncodeRegTfbsClusteredV3 ELF1 score:237, expCount:1, expNums:217, expScores:237, srow:1908294
34823 chr19 566481 566811 wgEncodeRegTfbsClusteredV3 EP300 score:335, expCount:2, expNums:190,519, expScores:335,252, srow:1908287
34823 chr19 566418 566713 wgEncodeRegTfbsClusteredV3 FOXP2 score:116, expCount:1, expNums:255, expScores:116, srow:1908272
34823 chr19 566514 566823 wgEncodeRegTfbsClusteredV3 GABPA score:159, expCount:1, expNums:220, expScores:159, srow:1908293
34823 chr19 566541 566850 wgEncodeRegTfbsClusteredV3 GATA1 score:155, expCount:1, expNums:497, expScores:155, srow:1908297
34823 chr19 566485 566894 wgEncodeRegTfbsClusteredV3 GATA2 score:535, expCount:3, expNums:221,498,586, expScores:181,224,535, srow:1908288
34823 chr19 566422 566761 wgEncodeRegTfbsClusteredV3 HDAC2 score:235, expCount:1, expNums:181, expScores:235, srow:1908274
34823 chr19 566442 566801 wgEncodeRegTfbsClusteredV3 IRF1 score:161, expCount:1, expNums:506, expScores:161, srow:1908282
34823 chr19 566494 566773 wgEncodeRegTfbsClusteredV3 JUND score:254, expCount:1, expNums:507, expScores:254, srow:1908289
34823 chr19 566293 566868 wgEncodeRegTfbsClusteredV3 KDM5B score:213, expCount:1, expNums:31, expScores:213, srow:1908267
34823 chr19 566422 566807 wgEncodeRegTfbsClusteredV3 MAX score:379, expCount:3, expNums:223,511,576, expScores:379,222,280, srow:1908275
34823 chr19 566478 566847 wgEncodeRegTfbsClusteredV3 MAZ score:473, expCount:1, expNums:512, expScores:473, srow:1908284
34823 chr19 566352 566780 wgEncodeRegTfbsClusteredV3 MYC score:260, expCount:3, expNums:487,488,575, expScores:260,200,215, srow:1908269
34823 chr19 566426 566825 wgEncodeRegTfbsClusteredV3 NR2F2 score:277, expCount:1, expNums:225, expScores:277, srow:1908276
34823 chr19 566207 566830 wgEncodeRegTfbsClusteredV3 PHF8 score:248, expCount:1, expNums:30, expScores:248, srow:1908266
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Omics Overlaps

Dmrid Omic Set Data Plot
34823 cellmeth_recounts PrEC: 17, LNCaP: 58, DU145: 0
34823 cellmeth_diffreps_PrECvsDU145 A=11, B=0, Length=240, Event=Down, log2FC=-Inf, padj=0.00313959514768542
34823 cellmeth_diffreps_PrECvsDU145 A=17, B=0, Length=360, Event=Down, log2FC=-Inf, padj=7.41301388411866e-05
34823 cellmeth_diffreps_LNCaPvsDU145 A=51.31, B=0, Length=840, Event=Down, log2FC=-Inf, padj=0