DMR 29893 chr8:49468251-49469100 (850bp)

DMR Stats
Positionchr8:49468251-49469100 (View on UCSC)
Width850bp
Genomic Contextintergenic
Nearest GenesEFCAB1 (154250bp away)
ANODEV p-value4.33801143155e-12
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
29893 chr8 49468339 49468354 tfbsConsSites V$GRE_C score:861, zScore:2.72, srow:5105200
29893 chr8 49468490 49468504 tfbsConsSites V$HNF1_01 score:798, zScore:1.67, srow:5105208
29893 chr8 49468636 49468650 tfbsConsSites V$HNF1_01 score:816, zScore:1.98, srow:5105215
29893 chr8 49468588 49468602 tfbsConsSites V$HNF3B_01 score:867, zScore:1.84, srow:5105214
29893 chr8 49468264 49468275 tfbsConsSites V$IK2_01 score:953, zScore:2.07, srow:5105197
29893 chr8 49468575 49468596 tfbsConsSites V$MEF2_03 score:800, zScore:2.1, srow:5105213
29893 chr8 49468811 49468819 tfbsConsSites V$MSX1_01 score:898, zScore:1.75, srow:5105220
29893 chr8 49468851 49468859 tfbsConsSites V$MSX1_01 score:942, zScore:2.59, srow:5105224
29893 chr8 49468341 49468352 tfbsConsSites V$MYOD_01 score:941, zScore:2.57, srow:5105203
29893 chr8 49468320 49468348 tfbsConsSites V$MYOGNF1_01 score:733, zScore:1.64, srow:5105199
29893 chr8 49468796 49468805 tfbsConsSites V$NFKAPPAB50_01 score:861, zScore:1.73, srow:5105219
29893 chr8 49468489 49468501 tfbsConsSites V$OCT1_03 score:881, zScore:1.92, srow:5105207
29893 chr8 49468310 49468324 tfbsConsSites V$OCT1_Q6 score:855, zScore:2.03, srow:5105198
29893 chr8 49468497 49468507 tfbsConsSites V$PAX4_02 score:926, zScore:2.57, srow:5105210
29893 chr8 49468656 49468669 tfbsConsSites V$POU3F2_01 score:791, zScore:1.74, srow:5105216
29893 chr8 49468496 49468511 tfbsConsSites V$S8_01 score:893, zScore:2.35, srow:5105209
29893 chr8 49468846 49468863 tfbsConsSites V$SRF_01 score:771, zScore:2.53, srow:5105222
29893 chr8 49468470 49468481 tfbsConsSites V$SRY_02 score:890, zScore:1.89, srow:5105206
29893 chr8 49468676 49468683 tfbsConsSites V$STAT1_03 score:997, zScore:1.94, srow:5105217
29893 chr8 49469019 49469026 tfbsConsSites V$STAT4_01 score:1000, zScore:1.65, srow:5105227
29893 chr8 49468367 49468375 tfbsConsSites V$STAT_01 score:918, zScore:1.95, srow:5105205
29893 chr8 49468339 49468354 tfbsConsSites V$TAL1ALPHAE47_01 score:889, zScore:2.13, srow:5105201
29893 chr8 49468339 49468354 tfbsConsSites V$TAL1BETAITF2_01 score:863, zScore:2.01, srow:5105202
29893 chr8 49468873 49468894 tfbsConsSites V$TCF11MAFG_01 score:747, zScore:1.76, srow:5105225
29893 chr8 49468845 49468861 tfbsConsSites V$YY1_01 score:867, zScore:1.82, srow:5105221

Omics Overlaps

Dmrid Omic Set Data Plot
29893 cellmeth_recounts PrEC: 3, LNCaP: 396, DU145: 28
29893 cellmeth_diffreps_PrECvsLNCaP A=4, B=318, Length=1100, Event=Up, log2FC=6.31, padj=0
29893 cellmeth_diffreps_LNCaPvsDU145 A=35.28, B=0.94, Length=400, Event=Down, log2FC=-5.24, padj=4.08953502356965e-08
29893 cellmeth_diffreps_LNCaPvsDU145 A=304.68, B=18.71, Length=660, Event=Down, log2FC=-4.03, padj=0
29893 cellexp id=ENSG00000253608, name=RP11-770E5.1, PrEC=8, str=27, LNCaP=0, str=0, DU145=0, str=0
29893 cellexp id=ENSG00000253688, name=RP11-567J20.2, PrEC=1, str=0, LNCaP=0, str=0, DU145=0, str=0
29893 tcgameth site:cg04920358, B=0.07, L=0.47, H=0.4
29893 tcgameth site:cg10826197, B=0.03, L=0.33, H=0.38
29893 tcgameth site:cg14095438, B=0.16, L=0.56, H=0.51
29893 tcgameth site:cg14907769, B=0.18, L=0.62, H=0.57
29893 tcgameth site:cg18991611, B=0.07, L=0.59, H=0.54
29893 tcgameth site:cg19414967, B=0.33, L=0.67, H=0.66
29893 tcgameth site:cg20527270, B=0.1, L=0.67, H=0.56
29893 tcgameth site:cg27038634, B=0.27, L=0.55, H=0.55