DMR 30218 chr9:6412301-6412850 (550bp)

DMR Stats
Positionchr9:6412301-6412850 (View on UCSC)
Width550bp
Genomic Contextpromoter
Nearest GenesUHRF2 (300bp away)
ANODEV p-value7.36160539934e-10
FrequenciesBenign: 3.0 (42.86%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30218 chr9 6412636 6413005 wgEncodeRegTfbsClusteredV3 RELA score:369, expCount:1, expNums:325, expScores:369, srow:4120173
30218 chr9 6412717 6413075 wgEncodeRegTfbsClusteredV3 RUNX3 score:1000, expCount:1, expNums:109, expScores:1000, srow:4120177
30218 chr9 6412382 6412865 wgEncodeRegTfbsClusteredV3 SETDB1 score:146, expCount:1, expNums:533, expScores:146, srow:4120160
30218 chr9 6412487 6413116 wgEncodeRegTfbsClusteredV3 STAT5A score:294, expCount:1, expNums:114, expScores:294, srow:4120163
30218 chr9 6412498 6413447 wgEncodeRegTfbsClusteredV3 TAF1 score:642, expCount:10, expNums:65,115,127,132,157,169,199,238,254,261, expScores:136,617,536,242,160,453,363,339,218,383, srow:4120166
30218 chr9 6412715 6413342 wgEncodeRegTfbsClusteredV3 TBL1XR1 score:371, expCount:1, expNums:316, expScores:265, srow:4120176
30218 chr9 6412772 6412792 tfbsConsSites V$STAT3_01 score:748, zScore:1.66, srow:5297836
30218 chr9 6412718 6412727 tfbsConsSites V$USF_Q6 score:952, zScore:2.58, srow:5297835
30218 chr9 6412586 6412841 wgEncodeRegTfbsClusteredV3 ZBTB33 score:125, expCount:1, expNums:246, expScores:125, srow:4120172
30218 chr9 6412792 6412796 phastConsElements100way lod=16 score:268, srow:9133871

Omics Overlaps

Dmrid Omic Set Data Plot
30218 cellmeth_recounts PrEC: 39, LNCaP: 302, DU145: 35
30218 cellmeth_diffreps_PrECvsLNCaP A=48, B=233, Length=640, Event=Up, log2FC=2.28, padj=0
30218 cellmeth_diffreps_PrECvsDU145 A=58, B=17, Length=380, Event=Down, log2FC=-1.77, padj=7.26627788439946e-05
30218 cellmeth_diffreps_LNCaPvsDU145 A=264.05, B=25.26, Length=740, Event=Down, log2FC=-3.39, padj=0
30218 tcgameth site:cg24119045, B=0.08, L=0.27, H=0.23