28459 | cellmeth_recounts | PrEC: 40, LNCaP: 736, DU145: 14 | |
28459 | cellmeth_diffreps_PrECvsLNCaP | A=107, B=642, Length=1480, Event=Up, log2FC=2.58, padj=0 | |
28459 | cellmeth_diffreps_PrECvsDU145 | A=369, B=30, Length=760, Event=Down, log2FC=-3.62, padj=0 | |
28459 | cellmeth_diffreps_LNCaPvsDU145 | A=947.17, B=30.87, Length=1840, Event=Down, log2FC=-4.94, padj=0 | |
28459 | cellexp | id=ENSG00000112699, name=GMDS, PrEC=1872, str=565, LNCaP=2030, str=1929, DU145=1037, str=916 | |
28459 | tcgameth | site:cg06960457, B=0.11, L=0.46, H=0.38 | |
28459 | tcgameth | site:cg08513472, B=0.15, L=0.56, H=0.51 | |
28459 | tcgameth | site:cg20384898, B=0.12, L=0.57, H=0.52 | |
28459 | tcgameth | site:cg21347053, B=0.23, L=0.59, H=0.54 | |
28459 | tcgameth | site:cg27478313, B=0.38, L=0.67, H=0.66 | |
28459 | tcgaexp | gene=GABBR1, entrez=2550, pos=chr6:826391-29600962(-), B=1121, L=1014, M=960, H=1101 | |
28459 | tcgaexp | gene=GMDS, entrez=2762, pos=chr6:1624035-2245868(-), B=1064, L=3195, M=2585, H=1636 | |
28459 | tcgaexp | gene=GPX5, entrez=2880, pos=chr6:15993-28502728(+), B=17, L=14, M=13, H=29 | |
28459 | tcgaexp | gene=HLA-A, entrez=3105, pos=chr6:1150036-29913661(+), B=36590, L=48530, M=36731, H=28885 | |
28459 | tcgaexp | gene=HLA-F, entrez=3134, pos=chr6:991622-29706966(+), B=2279, L=2960, M=2415, H=2101 | |
28459 | tcgaexp | gene=HLA-G, entrez=3135, pos=chr6:1095035-29977733(+), B=185, L=193, M=204, H=216 | |
28459 | tcgaexp | gene=HLA-H, entrez=3136, pos=chr6:1096103-29976954(+), B=3120, L=4199, M=3472, H=2680 | |
28459 | tcgaexp | gene=HLA-J, entrez=3137, pos=chr6:1213596-29977733(+), B=43, L=29, M=32, H=23 | |
28459 | tcgaexp | gene=HLA-L, entrez=3139, pos=chr6:1520255-30234728(+), B=65, L=64, M=68, H=63 | |
28459 | tcgaexp | gene=MOG, entrez=4340, pos=chr6:927718-29640149(+), B=2, L=1, M=1, H=1 | |
28459 | tcgaexp | gene=TRIM27, entrez=5987, pos=chr6:174180-28891768(-), B=3498, L=4532, M=4615, H=4568 | |
28459 | tcgaexp | gene=PPP1R11, entrez=6992, pos=chr6:1275163-30038108(+), B=4798, L=4525, M=4576, H=4488 | |
28459 | tcgaexp | gene=TRIM26, entrez=7726, pos=chr6:1392422-30181271(-), B=4299, L=4688, M=4414, H=4324 | |
28459 | tcgaexp | gene=OR2H2, entrez=7932, pos=chr6:858710-29556745(+), B=1, L=1, M=1, H=1 | |
28459 | tcgaexp | gene=TRIM10, entrez=10107, pos=chr6:1359959-30128711(-), B=1, L=1, M=1, H=1 | |
28459 | tcgaexp | gene=HCG9, entrez=10255, pos=chr6:1235684-29946177(+), B=1, L=0, M=1, H=1 | |
28459 | tcgaexp | gene=UBD, entrez=10537, pos=chr6:826391-29527702(-), B=1189, L=2016, M=1907, H=1455 | |
28459 | tcgaexp | gene=TRIM31, entrez=11074, pos=chr6:1318454-30080867(-), B=192, L=19, M=64, H=13 | |
28459 | tcgaexp | gene=OR12D2, entrez=26529, pos=chr6:667404-29365448(+), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=OR11A1, entrez=26531, pos=chr6:696260-29395509(-), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=OR2W1, entrez=26692, pos=chr6:315387-29012952(-), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=OR2J2, entrez=26707, pos=chr6:444717-29142351(+), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=OR2H1, entrez=26716, pos=chr6:729197-29432099(+), B=0, L=1, M=1, H=1 | |
28459 | tcgaexp | gene=ZNRD1, entrez=30834, pos=chr6:1269273-30032686(+), B=806, L=855, M=848, H=776 | |
28459 | tcgaexp | gene=HCG4, entrez=54435, pos=chr6:1059227-29760850(-), B=157, L=94, M=85, H=56 | |
28459 | tcgaexp | gene=TRIM39, entrez=56658, pos=chr6:1587150-30311506(+), B=1146, L=1029, M=1058, H=1050 | |
28459 | tcgaexp | gene=RPP21, entrez=79897, pos=chr6:1605807-30314635(+), B=996, L=1106, M=1089, H=1008 | |
28459 | tcgaexp | gene=RNF39, entrez=80352, pos=chr6:1278274-30043628(-), B=501, L=425, M=380, H=241 | |
28459 | tcgaexp | gene=ZNRD1-AS1, entrez=80862, pos=chr6:1208639-30029417(-), B=64, L=72, M=79, H=75 | |
28459 | tcgaexp | gene=HCG4B, entrez=80868, pos=chr6:1134224-29893428(-), B=23, L=27, M=25, H=20 | |
28459 | tcgaexp | gene=OR5V1, entrez=81696, pos=chr6:626454-29324054(-), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=OR12D3, entrez=81797, pos=chr6:644333-29343068(-), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=TRIM15, entrez=89870, pos=chr6:1371202-30140473(+), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=SCAND3, entrez=114821, pos=chr6:61611-28555112(-), B=519, L=631, M=811, H=931 | |
28459 | tcgaexp | gene=MAS1L, entrez=116511, pos=chr6:757511-29455679(-), B=2, L=1, M=1, H=1 | |
28459 | tcgaexp | gene=TRIM40, entrez=135644, pos=chr6:1344140-30116512(+), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=ZNF311, entrez=282890, pos=chr6:265991-28973093(-), B=189, L=178, M=186, H=171 | |
28459 | tcgaexp | gene=HLA-F-AS1, entrez=285830, pos=chr6:994885-29716826(-), B=155, L=105, M=86, H=59 | |
28459 | tcgaexp | gene=IFITM4P, entrez=340198, pos=chr6:1019089-29718925(-), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=ZFP57, entrez=346171, pos=chr6:943126-29644931(-), B=47, L=24, M=20, H=12 | |
28459 | tcgaexp | gene=HCG18, entrez=414777, pos=chr6:1548086-30294933(-), B=1177, L=1177, M=1233, H=1257 | |
28459 | tcgaexp | gene=OR2B3, entrez=442184, pos=chr6:357384-29055090(-), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=OR2J3, entrez=442186, pos=chr6:383070-29080603(+), B=0, L=0, M=1, H=1 | |
28459 | tcgaexp | gene=OR14J1, entrez=442191, pos=chr6:577912-29275432(+), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=OR10C1, entrez=442194, pos=chr6:710694-29408754(+), B=0, L=0, M=0, H=0 | |
28459 | tcgaexp | gene=SNORD32B, entrez=692092, pos=chr6:853056-29550105(+), B=0, L=0, M=0, H=0 | |