DMR 32977 chr14:95239351-95240650 (1300bp)

DMR Stats
Positionchr14:95239351-95240650 (View on UCSC)
Width1300bp
Genomic Contextintergenic
Nearest GenesGSC (2851bp away)
ANODEV p-value1.20534746205e-09
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
32977 chr14 95239376 95239679 cpgIsland CpG: 35 length:304, cpgNum:35, gcNum:197, perCpg:23, perGc:64.8, obsExp:1.1, srow:7330
32977 chr14 95240084 95240341 cpgIsland CpG: 21 length:258, cpgNum:21, gcNum:146, perCpg:16.3, perGc:56.6, obsExp:1.02, srow:7331
32977 chr14 95238212 95239375 cpgShore — values(x.gr)[overs$srow, ]:13461
32977 chr14 95239680 95240083 cpgShore — values(x.gr)[overs$srow, ]:13462
32977 chr14 95240342 95242341 cpgShore — values(x.gr)[overs$srow, ]:13463
32977 chr14 95239486 95239499 phastConsElements100way lod=45 score:370, srow:2861540
32977 chr14 95239518 95239524 phastConsElements100way lod=35 score:345, srow:2861541
32977 chr14 95239544 95239580 phastConsElements100way lod=224 score:529, srow:2861542
32977 chr14 95239583 95239621 phastConsElements100way lod=182 score:509, srow:2861543
32977 chr14 95239625 95239639 phastConsElements100way lod=128 score:474, srow:2861544
32977 chr14 95239654 95239661 phastConsElements100way lod=32 score:337, srow:2861545
32977 chr14 95239668 95239677 phastConsElements100way lod=40 score:359, srow:2861546
32977 chr14 95239680 95239694 phastConsElements100way lod=62 score:402, srow:2861547
32977 chr14 95239699 95239783 phastConsElements100way lod=519 score:612, srow:2861548
32977 chr14 95239797 95239827 phastConsElements100way lod=144 score:485, srow:2861549
32977 chr14 95239830 95239842 phastConsElements100way lod=46 score:373, srow:2861550
32977 chr14 95239861 95239864 phastConsElements100way lod=15 score:262, srow:2861551
32977 chr14 95239911 95239918 phastConsElements100way lod=26 score:316, srow:2861552
32977 chr14 95239921 95239924 phastConsElements100way lod=13 score:247, srow:2861553
32977 chr14 95239929 95239954 phastConsElements100way lod=100 score:449, srow:2861554
32977 chr14 95239961 95239971 phastConsElements100way lod=18 score:280, srow:2861555
32977 chr14 95240090 95240094 phastConsElements100way lod=14 score:255, srow:2861556
32977 chr14 95240115 95240116 phastConsElements100way lod=14 score:255, srow:2861557
32977 chr14 95240221 95240223 phastConsElements100way lod=13 score:247, srow:2861558
32977 chr14 95240353 95240359 phastConsElements100way lod=15 score:262, srow:2861559
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Omics Overlaps

Dmrid Omic Set Data Plot
32977 cellmeth_recounts PrEC: 7, LNCaP: 107, DU145: 99
32977 cellmeth_diffreps_PrECvsLNCaP A=10, B=61, Length=560, Event=Up, log2FC=2.61, padj=1.38026174005492e-08
32977 cellmeth_diffreps_PrECvsLNCaP A=0, B=18, Length=340, Event=Up, log2FC=Inf, padj=3.04238490738774e-05
32977 cellmeth_diffreps_PrECvsDU145 A=3, B=43, Length=520, Event=Up, log2FC=3.84, padj=1.21014621758047e-08
32977 cellmeth_diffreps_PrECvsDU145 A=0, B=17, Length=340, Event=Up, log2FC=Inf, padj=7.41301388411866e-05
32977 cellmeth_diffreps_LNCaPvsDU145 A=48.11, B=13.1, Length=220, Event=Down, log2FC=-1.88, padj=0.000653920563387995
32977 tcgameth site:cg01796166, B=0.27, L=0.59, H=0.56
32977 tcgameth site:cg02264229, B=0.6, L=0.76, H=0.77
32977 tcgameth site:cg04961582, B=0.42, L=0.72, H=0.69
32977 tcgameth site:cg08196032, B=0.23, L=0.5, H=0.52
32977 tcgameth site:cg10746936, B=0.28, L=0.69, H=0.64
32977 tcgameth site:cg14943113, B=0.21, L=0.47, H=0.49
32977 tcgameth site:cg19870698, B=0.15, L=0.49, H=0.51
32977 tcgameth site:cg26077454, B=0.33, L=0.57, H=0.58