DMR 36531 chr1:2464101-2464450 (350bp)

DMR Stats
Positionchr1:2464101-2464450 (View on UCSC)
Width350bp
Genomic Contextintergenic
Nearest GenesHES5 (2416bp away)
ANODEV p-value0.00345729219186
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 5.0 (55.56 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36531 chr1 2464011 2464934 cpgShelf — values(x.gr)[overs$srow, ]:201
36531 chr1 2464109 2464120 phastConsElements100way lod=28 score:323, srow:11319
36531 chr1 2464125 2464128 phastConsElements100way lod=17 score:274, srow:11320
36531 chr1 2464160 2464166 phastConsElements100way lod=16 score:268, srow:11321
36531 chr1 2464201 2464204 phastConsElements100way lod=18 score:280, srow:11322
36531 chr1 2464267 2464315 phastConsElements100way lod=172 score:503, srow:11323
36531 chr1 2464333 2464337 phastConsElements100way lod=26 score:316, srow:11324
36531 chr1 2464359 2464369 phastConsElements100way lod=55 score:390, srow:11325
36531 chr1 2464388 2464421 phastConsElements100way lod=167 score:500, srow:11326
36531 chr1 2464424 2464447 phastConsElements100way lod=150 score:489, srow:11327
36531 chr1 2464147 2464164 tfbsConsSites V$CMYB_01 score:845, zScore:2.69, srow:4258
36531 chr1 2464148 2464162 tfbsConsSites V$SPZ1_01 score:874, zScore:1.84, srow:4259
36531 chr1 2464154 2464166 tfbsConsSites V$SP1_Q6 score:899, zScore:1.72, srow:4260
36531 chr1 2464154 2464181 tfbsConsSites V$PAX5_01 score:827, zScore:2.67, srow:4261
36531 chr1 2464157 2464168 tfbsConsSites V$PAX4_03 score:941, zScore:2.26, srow:4262
36531 chr1 2464158 2464169 tfbsConsSites V$EGR1_01 score:826, zScore:1.64, srow:4263
36531 chr1 2464158 2464169 tfbsConsSites V$EGR2_01 score:856, zScore:2.13, srow:4264
36531 chr1 2464158 2464169 tfbsConsSites V$EGR3_01 score:867, zScore:2.37, srow:4265
36531 chr1 2464158 2464169 tfbsConsSites V$NGFIC_01 score:860, zScore:2.17, srow:4266
36531 chr1 2464158 2464172 tfbsConsSites V$E47_01 score:872, zScore:1.91, srow:4267
36531 chr1 2464159 2464170 tfbsConsSites V$AP2_Q6 score:876, zScore:1.67, srow:4268
36531 chr1 2464160 2464168 tfbsConsSites V$ZIC1_01 score:927, zScore:1.93, srow:4269
36531 chr1 2464160 2464168 tfbsConsSites V$ZIC3_01 score:924, zScore:1.89, srow:4270
36531 chr1 2464201 2464209 tfbsConsSites V$ZIC2_01 score:894, zScore:1.84, srow:4271
36531 chr1 2464203 2464216 tfbsConsSites V$RREB1_01 score:824, zScore:1.94, srow:4272
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Omics Overlaps

Dmrid Omic Set Data Plot
36531 cellmeth_recounts PrEC: 5, LNCaP: 139, DU145: 3
36531 cellmeth_diffreps_PrECvsLNCaP A=55, B=346, Length=1180, Event=Up, log2FC=2.65, padj=0
36531 cellmeth_diffreps_LNCaPvsDU145 A=6555.38, B=12.16, Length=5380, Event=Down, log2FC=-9.07, padj=0
36531 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36531 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305