DMR 30218 chr9:6412301-6412850 (550bp)

DMR Stats
Positionchr9:6412301-6412850 (View on UCSC)
Width550bp
Genomic Contextpromoter
Nearest GenesUHRF2 (300bp away)
ANODEV p-value7.36160539934e-10
FrequenciesBenign: 3.0 (42.86%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
30218 chr9 6412661 6413024 wgEncodeRegTfbsClusteredV3 ELK1 score:186, expCount:1, expNums:293, expScores:186, srow:4120175
30218 chr9 6412715 6413342 wgEncodeRegTfbsClusteredV3 TBL1XR1 score:371, expCount:1, expNums:316, expScores:265, srow:4120176
30218 chr9 6412717 6413075 wgEncodeRegTfbsClusteredV3 RUNX3 score:1000, expCount:1, expNums:109, expScores:1000, srow:4120177
30218 chr9 6412720 6413202 wgEncodeRegTfbsClusteredV3 EP300 score:286, expCount:3, expNums:145,304,519, expScores:156,286,203, srow:4120178
30218 chr9 6412728 6413390 wgEncodeRegTfbsClusteredV3 MAZ score:322, expCount:1, expNums:297, expScores:217, srow:4120179
30218 chr9 6412777 6413361 wgEncodeRegTfbsClusteredV3 FOXM1 score:617, expCount:1, expNums:90, expScores:211, srow:4120180
30218 chr9 6412793 6413072 wgEncodeRegTfbsClusteredV3 BCL11A score:141, expCount:1, expNums:82, expScores:141, srow:4120181
30218 chr9 6412793 6413139 wgEncodeRegTfbsClusteredV3 EGR1 score:461, expCount:3, expNums:87,138,216, expScores:461,150,228, srow:4120182
30218 chr9 6412810 6413099 wgEncodeRegTfbsClusteredV3 MEF2A score:177, expCount:1, expNums:93, expScores:177, srow:4120183
30218 chr9 6412816 6413008 wgEncodeRegTfbsClusteredV3 NFIC score:453, expCount:1, expNums:97, expScores:453, srow:4120184

Omics Overlaps

Dmrid Omic Set Data Plot
30218 cellmeth_recounts PrEC: 39, LNCaP: 302, DU145: 35
30218 cellmeth_diffreps_PrECvsLNCaP A=48, B=233, Length=640, Event=Up, log2FC=2.28, padj=0
30218 cellmeth_diffreps_PrECvsDU145 A=58, B=17, Length=380, Event=Down, log2FC=-1.77, padj=7.26627788439946e-05
30218 cellmeth_diffreps_LNCaPvsDU145 A=264.05, B=25.26, Length=740, Event=Down, log2FC=-3.39, padj=0
30218 tcgameth site:cg24119045, B=0.08, L=0.27, H=0.23